Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0157 |
Symbol | |
ID | 3833687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 181624 |
End bp | 183198 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637824229 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_425249 |
Protein GI | 83591497 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.506571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCCG CCCCCGCTTC CGCCGCCGTC TCCGGCGGTG CCTTGCCCTT GCGCGATCGC CTTGGCTTCT TCGCCCTGGT GGTCGGCATG TTCATGGCCA TCCTCGATAT CCAGATCGTC GCCAGTTCCC TGGCCGAGAT CCAGGCCGGC GTCAGTGCCG GTCCCGAAGA GATCAGCTGG GTACAGACCG GCTATCTAAT CGCCGAAGTG GTGATGATTC CGCTGTCGGG TTGGCTGTCG CGGTTGATGT CGACGCGCTG GCTGTTCACC ATGGCCAGCG GCGGCTTCAC CATCGCCAGC GGGCTGTGCG CCATCGCCTG GAATCTCGAA AGCCTGGTTG CCTTCCGCGT CGTTCAGGGA TTCCTGGGCG GGGCGATGAT CCCCACCGTC TTCGCCGCCG CCTTCGCCCT GTTCCCGGGC AAGAAGCAGG CCGGGGTGTC GGTGGTCATC GGCTTGGTGG CGACCTGCGC CCCGGCCCTG GGGCCGACCA TCGGCGGCCA TCTGACCGAG GCCCTGTCCT GGCACTGGCT ATTTTTGCTC AACCTGCCGG TCGGCGCCGC GGTGACGGTC GCCGCGGCCA CCCTGGTTCA TTTCGACGAG GCCGATCCCA GCTTGCTGCG CCGTATCGAC CTGATCGGCA TCGGTCTGGT CGCGGTCTGC CTGGGAAGCT TGCAGTATAT TCTGGAGGAA GGACCGCGCG ACGACTGGTT CGACTCGGCG CCCATCGTCT TTTTCACCGC CTGCGCGGCG ATCGGCGGCG TTTTGCTGGT TTGGCGCGAA CTGACGGCCA AGGACCCGGT GGTCGATCTG CGCGCCTTCC TTGATCGCAA TTTCGTTCTT GGCTGTCTTT ACAGCTTCAT CACCGGCGTC GGGCTTTATG GGGCGGTCTA TCTGATGCCG CTGTTCCTCG CCCGCGTCCG CGATCTCAAT CCGGCGCAGA TCGGCGAGGT GGTGATGATC ACCGGCCTGT TCCAGTTTCT GTCGGCGCCG CTGGCCGGAG CGCTGTCGCG CAAGCTTGAT CTGCGGGTGA TGCTGTCGTT CGGGTTGTTG ATGTTCGCCC TTGGCCTCTG GCTGAACACC CATCTGACCC ATGACTGGGA CTATTGGGAA TTCTTCCTGC CCCAGGCGGT GCGCGGGGTG TCGTTGATGT TCATCTTCAT CCCGATCAAT CGCCTGAGCC TGGGCACCCT GCCCAAGGAG AAGCTGGGCA ACGCCTCGGG CCTTTATAAT CTGATGCGCA ATCTGGGCGG GGCGATCGGG CTGGCGGCGA TCACCACCAT GCTGACCGAT CAGACCAAGA TCCATTATTC CTATCTGGCC GAAAACGTCA CCACCGCCCG GCTGGCCGCC GAGGCGACCC TGTCGGGCAT GGAGCGCCAT TTCGATCCGG TTCTTGGCAG TTCCTCGGCC CAGGCGGCGC TGGGACAGGT TCGTCAGATC GTGATGCGCG AGGCGACGGT GATGGCCTTC GCCGATGTCT TCACCGCCGT CGCCGTGGTC TTCGCCTTCG GCCTGCTGCT GATGCCTTTC GTCCACAAGG TTGGCGGCAA TGGTCCCGAT GGCGGCGGCC ATTGA
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Protein sequence | MAAAPASAAV SGGALPLRDR LGFFALVVGM FMAILDIQIV ASSLAEIQAG VSAGPEEISW VQTGYLIAEV VMIPLSGWLS RLMSTRWLFT MASGGFTIAS GLCAIAWNLE SLVAFRVVQG FLGGAMIPTV FAAAFALFPG KKQAGVSVVI GLVATCAPAL GPTIGGHLTE ALSWHWLFLL NLPVGAAVTV AAATLVHFDE ADPSLLRRID LIGIGLVAVC LGSLQYILEE GPRDDWFDSA PIVFFTACAA IGGVLLVWRE LTAKDPVVDL RAFLDRNFVL GCLYSFITGV GLYGAVYLMP LFLARVRDLN PAQIGEVVMI TGLFQFLSAP LAGALSRKLD LRVMLSFGLL MFALGLWLNT HLTHDWDYWE FFLPQAVRGV SLMFIFIPIN RLSLGTLPKE KLGNASGLYN LMRNLGGAIG LAAITTMLTD QTKIHYSYLA ENVTTARLAA EATLSGMERH FDPVLGSSSA QAALGQVRQI VMREATVMAF ADVFTAVAVV FAFGLLLMPF VHKVGGNGPD GGGH
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