Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0113 |
Symbol | |
ID | 3833868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 131507 |
End bp | 133573 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637824184 |
Product | type II secretion system protein E |
Protein accession | YP_425205 |
Protein GI | 83591453 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00290435 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGG AAGGCGAAGA GGGTCGGCGC GGGATGGGGC CGGAGACCCC GGCGAGCGAG GGACGCCGCC GCACCCTGGC CTCGGCCCTG CGCGAAGAGG ATCGCACCGG GGCCACGGCC TGGCCGCAGA CCGAGGAGGG CGAGCCCGGA TCCCCGCGCG ACGCTGGCGC CGGCGAGGGG GGCGTTGTGC CCACGCCCTT GCTGCGGCTG TCTTCGGCCC TGGCCCGGCG GATGGGCGGC GCCCCCCTCG CCCCGACCCT TGGCCAATCC CTGGAACTGG CCATGGCCGA TCACGCCGAC GATGAAAAGG CCGACTCCCT GGCCCATTCG GCCCCGCCAC CACCGACGAC CGCGCGCCGC GCCGCCGCGC CGCCGGCCCT GGTGCCGGCG CTGGGGTTGG GCGATCAGCT GCTGGCCGGC GGGTTGATCT CACGCGATCA GATGCGGGTG GCCCATATCG AACAAAAGCG CTCCGGGGCG CCCTTGGGGC AGGTTCTGGT CGATCTTGGG TTCATCACCG ATGGCGTGCT GGCCGAGGTG CTGGCCCAAA GCAGCGGTCA CGACCGCTTT GACGCCGCGT CGACGCTTGC CGATCCGGCG GCCCTGGCGC CCTTGCCCGA ACGCGAGGCC CGGCGTTTGC GGGTGTTCCC CGTCGGCCTG CGCGGCTCGC TGCTGCGCTT GGCCATGGTC GATCCCCTTG ATGTGGTGGC GATCGACGAG GTGCGCCGCC ACTATGGCCG CGATGTGCGG ATCGAACCGG TGGTGTCGTC GGAGGCCGAG ATCGCCCAGG CCATCGATCG CAGCTATGGC CATGTCCTGG CCCTTGATGG CGTGCTGCGC GAGCTTGAAA CCCTGGGGGC GGCCGGCGCC GATCCGGAAA GCTTGCGTGA TACCGACTCC CACCCGGTGG TGCGGCTGGT CAACGCCCTG CTGCTCGACG CCGTCAAGCG CCGGGCCTCG GATCTGCATT TCGAGCCCCA AGGGGCCTTT TTGCGGGTGC GCCTGCGCAT CGACGGCACG CTGAGCCAGA CGCTGATCTT CCATAAGCAA TATTGGCCGG CGGTGGCCCA GCGCCTGAAG ATCCTGGCCG GAATGAACAT CGCCGACCGC CTGGGGCCCC AGGATGGCCG GTTCTCGATG GCTATCGCCC ACCGCAAGAT CGACTTCCGC GCCTCGGTCA TCCCCACTGT CCATGGCGAG AACATGGTGC TGCGCGTGCT CGATCGCTCG GCCACCCCGC TCAAGCTCGA GCAACTGGCC TTGGCCCATG GCACGCTCGA TCCCCTGGAA CTGCTGGTCC GCCGGCCCGA AGGCCTGCTG TTGGTCACCG GCCCCACCGG TTCGGGCAAG ACCACCACGC TTTACGCCTT GATGGACCAT ATCAGCGGCC CCGAGATCAC CATCGTCACC TTGGAGGATC CGGTCGAATA CGACCTGCCG CTGCTGCGTC AGACCCAGGT GCGCGAAGGG GCGCGGCTGG GCTTCGCCGA TGGCATCCGC GCCCTGCTGC GCCAGGATCC CGATGTCATG CTGGTCGGCG AGATCCGCGA TGCCGATACC GCCGCCATGG CCCTGCGCGC GGCGATGACC GGCCATCAGG TCTATGCGAC GCTGCACGCC AATGACGCGC CTTCGGCCCT GCCGCGGCTG ATGGATCTGG GGCTGCGGCC GGGGCTGCTC GCCGGCTCGC TGATCGGCGT TCTCGCCCAG CGTCTGGTGC GCCGCCTGTG TCCGCACTGC CGGCAGAGCT ATCGCGCCTC GCCGGTGGAA TGCAAGATCC TGGGCCTTGA TGCCACGGAT CCGCCCGAGA TCTTCCGGGC GCGCGGCTGC GAGGCCTGCG GTCAAACCGG CTATCACGGC CGGGTGCCGA TCAGCGAATT GCTGAGCATT AGCCCCGAGA TCGACGACCT CATCGCCAGC GCCGCGCCCT TGGCCGAGAT CCGCGCCCTG GCGACCCGTC AGGGCTATCG GCCGATGCTC GATGACGGGG CGCGGCTGGT CTGCGAGGGG GTGATCGATG TGGCGGCGCT GATGCGCGCC ATCGACGTGA CCCGCCGGCT GGCCTGA
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Protein sequence | MTKEGEEGRR GMGPETPASE GRRRTLASAL REEDRTGATA WPQTEEGEPG SPRDAGAGEG GVVPTPLLRL SSALARRMGG APLAPTLGQS LELAMADHAD DEKADSLAHS APPPPTTARR AAAPPALVPA LGLGDQLLAG GLISRDQMRV AHIEQKRSGA PLGQVLVDLG FITDGVLAEV LAQSSGHDRF DAASTLADPA ALAPLPEREA RRLRVFPVGL RGSLLRLAMV DPLDVVAIDE VRRHYGRDVR IEPVVSSEAE IAQAIDRSYG HVLALDGVLR ELETLGAAGA DPESLRDTDS HPVVRLVNAL LLDAVKRRAS DLHFEPQGAF LRVRLRIDGT LSQTLIFHKQ YWPAVAQRLK ILAGMNIADR LGPQDGRFSM AIAHRKIDFR ASVIPTVHGE NMVLRVLDRS ATPLKLEQLA LAHGTLDPLE LLVRRPEGLL LVTGPTGSGK TTTLYALMDH ISGPEITIVT LEDPVEYDLP LLRQTQVREG ARLGFADGIR ALLRQDPDVM LVGEIRDADT AAMALRAAMT GHQVYATLHA NDAPSALPRL MDLGLRPGLL AGSLIGVLAQ RLVRRLCPHC RQSYRASPVE CKILGLDATD PPEIFRARGC EACGQTGYHG RVPISELLSI SPEIDDLIAS AAPLAEIRAL ATRQGYRPML DDGARLVCEG VIDVAALMRA IDVTRRLA
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