Gene Rru_A0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0088 
Symbol 
ID3834281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp101509 
End bp102531 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID637824158 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_425180 
Protein GI83591428 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02817] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.211102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TCGGTACCCA CGCCCCCCTG CCCATCGATC ATCCCGAGGC CCTGCTTGAT 
CTGGAGATCG ACAAGCCGGT TCCCGGACCC CGCGACCTGC TGGTTCGCAT CGAAGCCATC 
TCGGTCAATC CGGTCGATAC CAAGACCCGC AAGACCCGCC CGGCCAGCCC GGAGAACCCG 
GCGATCCTCG GCTGGGACGC CGCGGGCGTC GTGGAAGCGG TGGGCGAGTC GGTGACGCTG 
TTCAAGCCGG GCGAGGCGGT CTATTACGCC GGCGATCTGA CGCGGCCGGG CACCAATGCC 
CAATTCCATC TGGTCGACGA GCGCCTCGCC GCCCTCAAGC CGACCAGTCT GGATTTCGCC 
GAGGCCGCCG CCCTGCCGCT GACGACGATC ACCGCCTACG AGATGCTGTT TGATCGCCTG 
GGCGTTCCCC GGTCGTCACC CGAGGCCCTG GGCGAGGTCC GTTCGATCCT GATCGTCGGC 
GGGGCCGGCG GCGTTGGCTC GATCGCCATT CAGTTGGCGC GGCGGCTGAC CGGGCTGACG 
GTGATCGCCA CCGCCTCGCG CCCGGAAACC CGCGATTGGG TGAGCGCCAT GGGCGCCCAC 
CATGTGGTCG ATCATCGCGG CGATCTGGCC GAACAGATCA ACGCCCTGGG CGTCGGCCCG 
GTCGGCTTCA TCTTTTCGAC CACCCAAACG CCCAGCCATT TCCCGGCCCT GGCCAAAATC 
ATCGCCCCCC AGGGGCGGAT CGGCATGATC GATGACGGCG TCGGCCTGGA TTTTTCCCTG 
CTTAAGACCA AAAGCGCCTC GCTGCATTGG GAATTCATGT ACACCCGCTC GATGTTCCAT 
ACCGAGGACA TGATCGCCCA GCACAGCTTG CTGAGCGAGG TCGCCGGTTT GATCGACGAC 
GGCACGCTGC GCACCACGCT GACCGCCACC GACGGGCCGA TCTCGGCGGC GACGCTGAAG 
GCCGCCCATG CGACCCAGGA AAGCGGCACG ACCATCGGCA AGCGCGTGCT GGTCGGTTTC 
TAA
 
Protein sequence
MKAVGTHAPL PIDHPEALLD LEIDKPVPGP RDLLVRIEAI SVNPVDTKTR KTRPASPENP 
AILGWDAAGV VEAVGESVTL FKPGEAVYYA GDLTRPGTNA QFHLVDERLA ALKPTSLDFA 
EAAALPLTTI TAYEMLFDRL GVPRSSPEAL GEVRSILIVG GAGGVGSIAI QLARRLTGLT 
VIATASRPET RDWVSAMGAH HVVDHRGDLA EQINALGVGP VGFIFSTTQT PSHFPALAKI 
IAPQGRIGMI DDGVGLDFSL LKTKSASLHW EFMYTRSMFH TEDMIAQHSL LSEVAGLIDD 
GTLRTTLTAT DGPISAATLK AAHATQESGT TIGKRVLVGF