| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0066 |
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| Symbol | |
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| ID | 3834108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 76073 |
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| End bp | 78394 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824136 |
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| Product | PAS/PAC sensor Signal transduction histidine kinase |
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| Protein accession | YP_425158 |
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| Protein GI | 83591406 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.712477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAT GGTCCTCTTT TCGTCTTGAA AAAATGGAGG CTGATGTGGG TCGGCAGGAC
CATTCTCCGC AGTCTCTTGC CGTCTTGCGC AGCCACCCGA TGGTCCGCGC CATTCTTGAC
GCCCTGACCC TGCCCGCGGC GGTGATCATG GCCCGCGACG GCCGGGTTCT CGAGGGCAAC
GCCGCCTTCT TCGAGGCCCT GGGCCGGCCG GCCGACGCCG TGCTCGACCA TCCCGCCCCC
TTTGACGTGT CGATCGCCGA CGCGGCGGCG ACGGCCGGCG GCCCGGCCAG CCCTCCGCCC
TCGCGCCGGC GCTGTGCTTT CCTGCGCGCC GATGGCGTTC TCGTTCAGGC CACCTTGGGG
GTTGGCGTTC TGGAAGGGGT GGCCGGGCTG GTGCTGGTCA CCCTGGATGG CATCGCCGGG
GCCGATGGCT GTCCGCTGCG CCGACGGGCC GAAGCGACGG TGCCCTGCGC CGCCGACCGC
TTCCGCTCGC TTTTCGATCT GGCGCCGATC GGCATGGCGA TGCTCGATGG CGAGCGCCGC
TGGCGACAGG CCAATAGCGT GATGTGCCGG CTGCTGGGTG TTCCCTTCGA AGGGTTGGCC
GCGAAGCGCT GGTCCGATAG CGTCCACCCC GAAGACCGCG GCCGTGACGA ACGCTTTTTC
GCCAGTCTGC TGCGGAACGA CGACAAGGCC AGCACCACCA ATCTGCGGCT GGTCGCCGCC
GATGGCCGGG TGGTGCCGGT CACCCTGTCG CTGGGCGTGA TGCGCGATGG ACCGAAGGGG
CAGTCCGACC AGATCCTTGT GCTGGTCCAA GACATTTCCG AACGGGTGGA CTGGGAAGCG
ACCAAGGCCG AGAACGAGGC CCGGCTGCGT TCGCTGATCA ACGCCACCAC CGATGCGATT
TTCCTGCTTG ATCCCGATGG TGCCATCCGG GTCATCAACC GCGCCGGAGC CCGGTTGCTG
GGCACCACGG CGCGGGCGGC GGCGGGCCGC AGCTTCTATG AGTTCCTCGA CGCTCCGCAG
GCGACGGAGC GACGCGCCCT GTTTGGCGAA GTGCTGGCGA CCCTGCTGCC GGTCAACGGC
ATCGAGCGCT GGGGCGAGCG TTGGCTCGAT ATGGTGGTTT TTCCGGTGGT CGACGGCGAT
GGCAAGGCGA TGGGGGTGAC GCTGTTCACC CGCGATATCA CCTCGCGCCG CGAAGCCGAG
GACCGGGCGC GGGCCGCCGA GCGCCATCTG CTTGAGGCCA CCGAACTGAT GTCGGCGGCG
ATGCTGCTGT TCGACCCCCA GGGTATTCTG GTCTTGATCA ACTCCGCCTG CCGGGCCGCC
CTGCCCGACC TGGAGGACAT CCTTCATCCC GGCCTGAGCT TTATCGAACT GCGCGCCGCC
ATCGTCGCCC GCCGGTTGTT TGTCCAGGCG ATCACCGAGT CGCAGGGCGG GATCAAGGGC
GGAACGCCCG GTCCGGCGCC GATCGAGGTC CGCGGCAAGG ACGGGCGGTG GCTGTTGATA
CGCCAGAGCG CGACCTCAAG CGGCTATACC CTGATCCTGG GCACCGATAT CACCGAATTG
AAACGGCGCG AGCGGGCCTT GGCCGATGCC AAGGAAGTCG CCGAATACGC CAACCGGGCC
AAAAGCGAGT TTCTGGCCAA TATGAGCCAT GAACTGCGCA CGCCGCTCAA CGCCATCATC
GGTTTTTCCG ATATCACCCG CCATCAGATG TTCGGGCGGC TCGATAACCC GGTCTATGTG
GATTACGCCC GCAACATCTA TGACTCGGGC ACGCATCTGC TGGAGATCAT CAGCGATATC
CTGGATCTGG CCAAGATCGA GGCCGGCGAA CTGGGGCTCG ACGAGGAGGA GGTCGATGCC
GCCCGTCTGG TCGACAGCGC CATCCAGATG GTGACGCCGC GCGCCACGTC CAAACGCATC
GCCTTGACCA ACCTGCTGAC CGGCGATCTG CCCCGCTTGT GGTGCGATCC CTTGCGACTC
AAGCAGGTGC TGATCAACCT GTTGTCCAAT GCCGTCAAAT ACACCCAGGA AGACGGGGCG
GTGGCGGTGA CCGCCCGGCT GGCCGGCGGG GACGGTCTGG CGATTTCGGT GATCGACACC
GGCATCGGCA TGGACGAGGC CGGCATTCAG GTGGCGATGA CCGCCTTTGG TCAGGTCGAA
AGCCCCTATT CCCGCCGCCA GGGCGGCACC GGCCTGGGCT TGCCGCTGAC CCGCAAGCTG
ACCGAGGCCC ATCAGGGGTG TTTGACCATC GCCAGCCGCC CGGGCGAGGG CACGACGGTG
ACCATCCTGC TGCCCGCCCA TCGCCTGCGG GCCGCTTCTT AG
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| Protein sequence | MIKWSSFRLE KMEADVGRQD HSPQSLAVLR SHPMVRAILD ALTLPAAVIM ARDGRVLEGN
AAFFEALGRP ADAVLDHPAP FDVSIADAAA TAGGPASPPP SRRRCAFLRA DGVLVQATLG
VGVLEGVAGL VLVTLDGIAG ADGCPLRRRA EATVPCAADR FRSLFDLAPI GMAMLDGERR
WRQANSVMCR LLGVPFEGLA AKRWSDSVHP EDRGRDERFF ASLLRNDDKA STTNLRLVAA
DGRVVPVTLS LGVMRDGPKG QSDQILVLVQ DISERVDWEA TKAENEARLR SLINATTDAI
FLLDPDGAIR VINRAGARLL GTTARAAAGR SFYEFLDAPQ ATERRALFGE VLATLLPVNG
IERWGERWLD MVVFPVVDGD GKAMGVTLFT RDITSRREAE DRARAAERHL LEATELMSAA
MLLFDPQGIL VLINSACRAA LPDLEDILHP GLSFIELRAA IVARRLFVQA ITESQGGIKG
GTPGPAPIEV RGKDGRWLLI RQSATSSGYT LILGTDITEL KRRERALADA KEVAEYANRA
KSEFLANMSH ELRTPLNAII GFSDITRHQM FGRLDNPVYV DYARNIYDSG THLLEIISDI
LDLAKIEAGE LGLDEEEVDA ARLVDSAIQM VTPRATSKRI ALTNLLTGDL PRLWCDPLRL
KQVLINLLSN AVKYTQEDGA VAVTARLAGG DGLAISVIDT GIGMDEAGIQ VAMTAFGQVE
SPYSRRQGGT GLGLPLTRKL TEAHQGCLTI ASRPGEGTTV TILLPAHRLR AAS
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