| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0047 |
|---|
| Symbol | |
|---|
| ID | 3834377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 48770 |
|---|
| End bp | 50377 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637824117 |
|---|
| Product | ABC transporter component |
|---|
| Protein accession | YP_425139 |
|---|
| Protein GI | 83591387 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAT CCATTGCTCT TGCCAATCTT GGCTGGTCCA CGCCTGACGG CACCGCGCTT
TTCACCAATC TGACTCTTAC CTTCGGACCG GAGCGGATCG GCCTTGTCGG GCGCAACGGC
ACCGGCAAAA CGACCTTGCT GCGGTTGATC CAGGGGGCGT TGGCGCCACA GGCCGGCACG
ATTCAGGTGA CGGGAACCCT GGGCTGGCTG CGTCAGGATG TGTCGTCCAC CCCCAAGGAT
ACCCTTGCCG ATCTGTTCGA CGCGGCGCCC GCGCTTGCCC TGCTCGACCG CGCCGAAATC
GGACAGGCCA CCGCCACGGA ACTGGCCGAG GCGGATTGGA CGCTTCCCGC CCGGATCGAA
AGCGCCCTGT CGCGCTTTGG CATCGAGGCT GATCTCCAAA CCCCGCTTTG CGCCCTCTCC
GGCGGACAGC GTACCCGCGC CGGGCTCGCC GCCCTGATCT TCTCCGCGCC CGATTTCCTG
CTGCTTGATG AACCGACGAA TACTCTCGAT CGCAGCGGCC GGCGGGCCGT GATCGACCTT
ATCAAGGGCT GGCGGGGAGG GGCGATCGTC GTCAGCCATG ACCGCGAGGT GCTGGAAGAA
ATCGATGGCA TTGTGGACCT CACCACCCTG GGGGCCACTT TCTACGCCGG GAATTACAGC
CGCTATCGGC TGCGCAGGGC CGAAGAGCTT CAGACGGCCG CCGAGGATGT GGCCCATGCG
GCGAAACGTC AGGCCGAAAG TGACCGGCGC GCGCAACAGG CCGCCGAGCG CAAGGCCCGC
CGAGACAGCG CCGGGCGCAA AACCCGGGCC CGCAACGATC AGCCGAAAAT CCTGCTTGAT
CGGGCAAAAG AGCGGGCCGA GACCTCGGGC GGCGCCAATG CCCGCCTGCG CGAAGCCCGG
CGCAAGGAGG CGCAGGCCGA CCTTGCCGCC GCACGGGCGC GGATCGAGGT ATTGCAACCG
ATCCGCATGG ATATTCCCTC GACGCATCTC CCGGCCGATA AGCTGGTGGC GAGACTTGAA
GGCGTAACCG GCGGATATGA TGCGGACCGG CCAGTGATCG GCAACCTGTC CTTAACCCTC
ACCGGCCCCG AGCGGATCGC CTTCACCGGC CCCAATGGCT GTGGCAAGAC AACCCTTCTT
TGGCTGATCA CCGGTAAACT GCGCGCGCAG CGGGGCAGGA TCGACCTTTA TGTTCCCCAT
GCCCTTTTGG ATCAGCAGGT CGGATTGCTC GATCCCGGCC TTTCCATTCG CAATAATTTT
CTGCGCCTGA ACCCTCAAGC TGACGAGAAC CAGTGTCGCG CCGCCTTGGC CCGCTTCCAG
TTTCGCGCCG GGGACGCCCT GCAAACGGTG GGCACGCTCA GCGGCGGCCA AAAACTGCGC
GCGGGCCTTG CCTGCACCTT GGGTCGGGCG CAACCACCGG GACTTCTTAT GCTGGATGAG
CCGACCAACC ATCTTGATCT GGAGGGGATC GAGGCCCTGG AAGCGGCGCT CTCCGCCTAT
GACGGGGCCC TGCTGGTGGT CAGTCACGAC GAGGCCTTTC TGGAACGGCT GTCTTTGGAT
CGAAGGGTCG ACCTTCGATC CAAAGAAGAG AGCAGAGCGC GACGATGA
|
|---|
| Protein sequence | MSASIALANL GWSTPDGTAL FTNLTLTFGP ERIGLVGRNG TGKTTLLRLI QGALAPQAGT
IQVTGTLGWL RQDVSSTPKD TLADLFDAAP ALALLDRAEI GQATATELAE ADWTLPARIE
SALSRFGIEA DLQTPLCALS GGQRTRAGLA ALIFSAPDFL LLDEPTNTLD RSGRRAVIDL
IKGWRGGAIV VSHDREVLEE IDGIVDLTTL GATFYAGNYS RYRLRRAEEL QTAAEDVAHA
AKRQAESDRR AQQAAERKAR RDSAGRKTRA RNDQPKILLD RAKERAETSG GANARLREAR
RKEAQADLAA ARARIEVLQP IRMDIPSTHL PADKLVARLE GVTGGYDADR PVIGNLSLTL
TGPERIAFTG PNGCGKTTLL WLITGKLRAQ RGRIDLYVPH ALLDQQVGLL DPGLSIRNNF
LRLNPQADEN QCRAALARFQ FRAGDALQTV GTLSGGQKLR AGLACTLGRA QPPGLLMLDE
PTNHLDLEGI EALEAALSAY DGALLVVSHD EAFLERLSLD RRVDLRSKEE SRARR
|
|---|
| |