| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0032 |
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| Symbol | |
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| ID | 3834133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 35787 |
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| End bp | 37271 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637824102 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_425124 |
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| Protein GI | 83591372 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.949797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTCT GGATCCTGGC CATCGCCCTG GCCGTCGCCA CCTGCCTGCT GCTCGCCCGC
CCGCTGTTGC GCCGCGACGG CGCCCCGCCG CCCCGGGCGC GGGGGGAGTA CGATCTCGCC
GTCTACCGCG ATCAGCTTGG CGAGCTTGAG CGCGATGTCG ATCGCGGCCT GCTTGGCGCC
GATCAGGCCG AGGCCGCCCG CGTCGAGGTC GAGCGCCGCA TGCTGGCCGC CGCGCCGCCG
CCGCCCGCCG CGTCCGATAC GCCGCAGGCG CCGCCCCCGT CCGCCGGTGG GGACGGCCGC
AAGGCCGTGC TTAGCCTGAT CGCCCTGGTT CCGCTGGCGG CTTTGGCGCT TTATCTTGTC
GTCGGCAGCC CCGGCCGACC CGATGTTCCC CATAACGAGC GCTTGGCCCA ACTCCACGAG
GAGCAGCGCG ACCAAACCGC CCAGAGCGCC GATCAGATCG CCCGCCTGCG CGCCGCCCTG
GCCTCTGACC CCGATAATCT GGAGGCCAAG CTGCTGCTGG GCAGCGCGCT GGCCCAAAGC
GGCGCCCTGG CCGAAGCCGC GCCGCTGCTG GCCGAGGCCG CCCGCGCCGC GCCCGACTCG
CTGGCCGTGC AAAGCGCCTA TGCCCAGTTC CTGGTGATGG CCCGCAACGG CCAGATCGCC
GATGACGCCC ATGGGGTGCT GGTCCATATC CTGGGGATCG ACCCCGGCGA CGCCCGCGCC
CGCTTCTTCC TGGGGCTCGA ACGGCTGCAG ATGGAAGACC CCCAGGGCGC CCTGGCGATC
TGGCGCGATC TTCAGGCCGA CAGCCCGGCC GATGCGCCGT GGATGGCGAT GATCGCCGAG
AACATCGCCC AGGTCGCCAC CGAGGCCGGG ATCGAGCCGC AAAGCATTCC CCCCCGCCAT
CCCTTGGCCC TGCTCAACGA CGACAAGCAG GCCACCGAAG GCCGGACCGG CGCCCCGCCC
AAGCCCGCAC CCGCCAAGCC CAACCCCGCC GCCGCCGCCA CCGCCGGGAC CGTCCCCGCC
GCCGAACGCG AGCGCATCGA GGTGATGGTC GATGGTCTGG CCAGCCGCTT GGCCGACCAG
CCCGACGACG CCGATGGCTG GATGATGCTT GGGCGCAGCC GGATCGTCCT CGGTCAGCCC
GACGCCGCCG CCGAGGCCTA TGGCCGCGCC GTTGCCCTGC GCCCCGATGA TCTTGACGCC
AAGCGCCTTC AGGCCCGCGC CCTGCTGGCC GGCGCCCAGA CCAAAGCGCC CTCGCCGGCC
AAACCGGCGC CGCCGCCGCC GGCGGTCTTC ACCCTGATGG CCGATATCCT GGCCGGCGCC
CCCGAGGACC GCGAAGCCCT GTTCTTCGTG GGCCTGGAAG CGGCCGAAAA AGGCGACTCG
GAACGCGCCC GCAGCCTATG GACTCGGCTG ATCGCCGCCC TCGACCCCCA ATCGGATCTG
GCCCTCGAAC TGCGCAAACG CCTGGACGCC CTGCCCCCCG CCTAA
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| Protein sequence | MMFWILAIAL AVATCLLLAR PLLRRDGAPP PRARGEYDLA VYRDQLGELE RDVDRGLLGA
DQAEAARVEV ERRMLAAAPP PPAASDTPQA PPPSAGGDGR KAVLSLIALV PLAALALYLV
VGSPGRPDVP HNERLAQLHE EQRDQTAQSA DQIARLRAAL ASDPDNLEAK LLLGSALAQS
GALAEAAPLL AEAARAAPDS LAVQSAYAQF LVMARNGQIA DDAHGVLVHI LGIDPGDARA
RFFLGLERLQ MEDPQGALAI WRDLQADSPA DAPWMAMIAE NIAQVATEAG IEPQSIPPRH
PLALLNDDKQ ATEGRTGAPP KPAPAKPNPA AAATAGTVPA AERERIEVMV DGLASRLADQ
PDDADGWMML GRSRIVLGQP DAAAEAYGRA VALRPDDLDA KRLQARALLA GAQTKAPSPA
KPAPPPPAVF TLMADILAGA PEDREALFFV GLEAAEKGDS ERARSLWTRL IAALDPQSDL
ALELRKRLDA LPPA
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