Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0012 |
Symbol | |
ID | 3833899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 12910 |
End bp | 13881 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637824081 |
Product | hypothetical protein |
Protein accession | YP_425104 |
Protein GI | 83591352 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.541863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACG CGGCGCCGGC CTTCCCCCCT TCGCCCACGG CCGGATCCCG GCTGATCCGG GCGTTGGGCG TGGCCGCCCT GCTGGTCCTC GCCCCGACCG CCGCCGGGGC GCAGACGGCC GGGGGCCAGC CGCTCGAGGT CTATGCCGAT GACGGGATCG AATGGCGCCG CGACGAGGCC GTTTACATCG CCAACGGCAA TGCCGCCGCC ATCCAGGGCG ACAGCGAGGT CCGCGCCGAC CGCCTGCTCG CCCGCTATCG CACCGATGCC AGCGCCGGCG CGGAGTCGAG CGATACCGGC GGTGGCGACA TCTACCGCAT GGAAGCCCAC GGCAATGTCC GCATCCTGCT GACCGATCGC ACCATCACCG GCACCGACGC CGTGCGCGAT CTTGATCGCA AGGTCATGTG GCTGACCGGC GACAATCTCA AAATGGAATC GGCCTCCGAC ATCGTCACCG CCGACGACAG TCTGGAGTAT TGGGAAGAGC GCAATCTGGC GGTGGCGCGC GGCAATGCCA CCTCGCGCCA GATCGCCTCG CGCCAGACCA TCACCGCCGA CGTGCTGACC GCCTATTTCA AGGACGCCTC CACCCCCAAG ACCGCCGGCT CCGCCAAGGG CAAGCCCGCG ACAAGCAAAT CCGGCGCCGG CTTGGCCGCG CCGGCCGAGG GATCGAATAT CAAGGTGATG ACGGCGGTGG GCAATGTGGT GGTCGTCACC CCCAACGAGG TGATCCGGGG CGACGAGGCG ACCTATGACC CGACCAGCGG TCAGGCGACG GTGCTTGGCG CGGTGCGCAT CACCACCGAG GGCGAGCAAC TTAACGGCAC CCGGGCCACG GTCAACATGA AGACCGGGGT CAGCCGGCTG TTCGGCGATG GCCAGGACCG GGCACGGGCC TTGTTCAAAC CCTCGGCGAA CGGTAATGGT GAGCGCAAGG GATTGATCGG CGGACAGGGA GGGACGAAAT GA
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Protein sequence | MTHAAPAFPP SPTAGSRLIR ALGVAALLVL APTAAGAQTA GGQPLEVYAD DGIEWRRDEA VYIANGNAAA IQGDSEVRAD RLLARYRTDA SAGAESSDTG GGDIYRMEAH GNVRILLTDR TITGTDAVRD LDRKVMWLTG DNLKMESASD IVTADDSLEY WEERNLAVAR GNATSRQIAS RQTITADVLT AYFKDASTPK TAGSAKGKPA TSKSGAGLAA PAEGSNIKVM TAVGNVVVVT PNEVIRGDEA TYDPTSGQAT VLGAVRITTE GEQLNGTRAT VNMKTGVSRL FGDGQDRARA LFKPSANGNG ERKGLIGGQG GTK
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