Gene Rru_A0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0012 
Symbol 
ID3833899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp12910 
End bp13881 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content68% 
IMG OID637824081 
Producthypothetical protein 
Protein accessionYP_425104 
Protein GI83591352 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.541863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACG CGGCGCCGGC CTTCCCCCCT TCGCCCACGG CCGGATCCCG GCTGATCCGG 
GCGTTGGGCG TGGCCGCCCT GCTGGTCCTC GCCCCGACCG CCGCCGGGGC GCAGACGGCC
GGGGGCCAGC CGCTCGAGGT CTATGCCGAT GACGGGATCG AATGGCGCCG CGACGAGGCC
GTTTACATCG CCAACGGCAA TGCCGCCGCC ATCCAGGGCG ACAGCGAGGT CCGCGCCGAC
CGCCTGCTCG CCCGCTATCG CACCGATGCC AGCGCCGGCG CGGAGTCGAG CGATACCGGC
GGTGGCGACA TCTACCGCAT GGAAGCCCAC GGCAATGTCC GCATCCTGCT GACCGATCGC
ACCATCACCG GCACCGACGC CGTGCGCGAT CTTGATCGCA AGGTCATGTG GCTGACCGGC
GACAATCTCA AAATGGAATC GGCCTCCGAC ATCGTCACCG CCGACGACAG TCTGGAGTAT
TGGGAAGAGC GCAATCTGGC GGTGGCGCGC GGCAATGCCA CCTCGCGCCA GATCGCCTCG
CGCCAGACCA TCACCGCCGA CGTGCTGACC GCCTATTTCA AGGACGCCTC CACCCCCAAG
ACCGCCGGCT CCGCCAAGGG CAAGCCCGCG ACAAGCAAAT CCGGCGCCGG CTTGGCCGCG
CCGGCCGAGG GATCGAATAT CAAGGTGATG ACGGCGGTGG GCAATGTGGT GGTCGTCACC
CCCAACGAGG TGATCCGGGG CGACGAGGCG ACCTATGACC CGACCAGCGG TCAGGCGACG
GTGCTTGGCG CGGTGCGCAT CACCACCGAG GGCGAGCAAC TTAACGGCAC CCGGGCCACG
GTCAACATGA AGACCGGGGT CAGCCGGCTG TTCGGCGATG GCCAGGACCG GGCACGGGCC
TTGTTCAAAC CCTCGGCGAA CGGTAATGGT GAGCGCAAGG GATTGATCGG CGGACAGGGA
GGGACGAAAT GA
 
Protein sequence
MTHAAPAFPP SPTAGSRLIR ALGVAALLVL APTAAGAQTA GGQPLEVYAD DGIEWRRDEA 
VYIANGNAAA IQGDSEVRAD RLLARYRTDA SAGAESSDTG GGDIYRMEAH GNVRILLTDR
TITGTDAVRD LDRKVMWLTG DNLKMESASD IVTADDSLEY WEERNLAVAR GNATSRQIAS
RQTITADVLT AYFKDASTPK TAGSAKGKPA TSKSGAGLAA PAEGSNIKVM TAVGNVVVVT
PNEVIRGDEA TYDPTSGQAT VLGAVRITTE GEQLNGTRAT VNMKTGVSRL FGDGQDRARA
LFKPSANGNG ERKGLIGGQG GTK