| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0004 |
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| Symbol | gyrB |
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| ID | 3833891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 4362 |
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| End bp | 6770 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637824073 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_425096 |
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| Protein GI | 83591344 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC AGGCCTATAC ATCCGAATCC ATCAAGGTTC TCAAAGGACT GGAGGCGGTG
CGCAAGCGCC CCGGCATGTA CATCGGCGAT ACCGACGACG GGTCAGGCCT GCACCACATG
GTCTATGAGG TGGTTGATAA CGCCATCGAC GAGGCGCTCG CCGGTTACTG CGATCACTCC
GAGGTCATTC TCAACGGCGA TGGCTCGGTG ACGGTCTGTG ACAATGGCCG CGGCATCCCC
GTCGATATCC ACCGCGAGGA GGGGGTGAGC GCCGCCGAGG TGATCATGAC CCAGCTGCAT
GCCGGCGGAA AGTTCGACCA GAATTCCTAC AAGGTGTCGG GCGGGCTGCA CGGCGTGGGC
GTATCGGTGG TCAACGCCCT GTCGGACTGG CTTGATCTGC GCATCTGGCG CGACGGCAAG
GAACACTACG TGCGCTTCGA GCACGGCGAG GTGGTGGCGC CGCTGAAGGT GGTGGGCGAC
TGCGGCGACC GCACCGGCAC CGAGATCACC TTTTTGGCCT CGCCGGCGAT CTTCGCCATC
ACCACCTATG ATTACGCCAC CCTGGAGCAT CGCCTGCGCG AGCTGGCCTT CCTCAATTCC
GGGGTGCGGC TGCTGTTGAC CGACAAGCGC GGCACCGAGC CGCGCACCAC CAAATTCCAC
TACGACGGCG GCATCGAGGA ATTCGTCCGC TATCTCGACA AGTCGAAAAC CGTTCTGCAC
AGCCCGCCGG TCACGGCGAT CGGCGAACGC GACGGCATGA TCGTGGAACT GTCGCTGGAA
TGGACCGACA GCTACCACGA GACGGTGCTG TGCTTCACCA ACAACATCCC CCAGCGCGAT
GGCGGCACCC ATATGGCCGG CTTCCGCGGC GGTCTGACCC GCACCCTCAA CAGCTACGCC
CAAGACAGCG GGCTGATGAA AAAGGAAAAG GTGACGCTGA CCGGCGATGA CATGCGCGAG
GGGTTGACCT GCGTGCTGTC GGTCAAGGTT CCCGATCCCA AGTTCTCCAG CCAGACCAAG
GAAAAGCTGG TTTCAAGCGA GGTTCGGCCG GTGGTCGAGG CCGTGGTCGT CGAGCGTCTG
GGCCAGTGGC TGGAGGAACA CCCTCAGGAG GCCCGCAAGA TCATCGGCAA GGTGGTGGAA
GCCGCCGCCG CCCGCGAGGC CGCCCGCCGC GCCCGCGAAC TGACCCGGCG CAAGGGCGCG
CTCGACATGG CCAGCCTGCC CGGCAAGCTG GCCGACTGTC AGAACCGCGA TCCGGCCCAG
TCCGAACTGT TCATCGTCGA GGGAGACTCC GCCGGCGGCT CGGCCAAGCA GGGGCGCGAT
CGCGGCTATC AGGCGATCTT GCCGTTGCGC GGCAAGATCC TCAACGTCGA GCGGGCGCGC
TTTGACAAGA TGCTATCCTC GGCGGAAATC GGCACGCTGA TCGCCGCGCT TGGCACCGGC
ATCGGCAAGG ATGATTTCGA TGTCGGCAAG GCCCGCTACC ACAAGATCAT CATCATGACC
GACGCCGACG TCGACGGCAG CCATATCCGC ACCCTGCTGT TGACCTTCTT CTTCCGCCAG
ATGCCCGAGG TCGTCGAGAA GGGCTATCTT TATATCGCCC AGCCGCCGCT GTATCGGGCC
AAGCGCGGCA ATTCCGAGCA GTACCTCAAG GACGACCGCG AGCTTGAGGA CTATCTGCTG
GATACCGGCC TGGATGAGAC CGTCTACACC ACCGCCGCCG GCGTGCAGAT GGCCGGTCCC
GATCTGCGCG CCCTGGTCGA ACGCGCCCGC CTTGCGCGCA ACGCCATCGC CGCCATGGGC
CGCAAGGTGC CGTGGGTCTT GCTTGAACAG GCGGCGGTCG CCGGGGCCTT CCATACCGAG
ATCGTCAATG ACGACGCCCG CGCCAGCGCC GCGGCCGCCG ATGTCGCCCG CCGGATCGAC
GCCCTGGAAA GCCCGCTGGA ACGCGGCTGG ACCGGCACCC TGGCCGCCGG GGGCGGCATG
GTGTTCCAGC GCACGCTGCG CGGGGTGACC GAGACCCATG TCATCGATCC CCAGGTCATC
CACAGCACCG AGGCCCGCCG GCTTGACTCC ATGGCGGCCG CCTTGCGCGA ATTCTATGAG
CAGCCCGGTC GCCTGCGGAT CAAGGACGGC GACCAGATCA TCCCCGGCCC GATGACCTTG
ATCAACGCCG TGATGGCCGC CGGCCGCAAG GGCATCGCCA TCCAGCGCTA TAAGGGCCTG
GGCGAGATGA ACCCCGAGCA GCTGTGGGAA ACCACCCTTG ATCCCAATGT GCGCCGCCTG
CTGCAGGTGA AGGTCAATCA GGTCAGCGAC GCCGAGGATG TGTTCAGCAC CCTGATGGGC
GACATCGTCG AACCCCGCCG CGACTTTATC CAAGACAACG CCCTGAACGT CCAGAACCTG
GACGTTTAA
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| Protein sequence | MTQQAYTSES IKVLKGLEAV RKRPGMYIGD TDDGSGLHHM VYEVVDNAID EALAGYCDHS
EVILNGDGSV TVCDNGRGIP VDIHREEGVS AAEVIMTQLH AGGKFDQNSY KVSGGLHGVG
VSVVNALSDW LDLRIWRDGK EHYVRFEHGE VVAPLKVVGD CGDRTGTEIT FLASPAIFAI
TTYDYATLEH RLRELAFLNS GVRLLLTDKR GTEPRTTKFH YDGGIEEFVR YLDKSKTVLH
SPPVTAIGER DGMIVELSLE WTDSYHETVL CFTNNIPQRD GGTHMAGFRG GLTRTLNSYA
QDSGLMKKEK VTLTGDDMRE GLTCVLSVKV PDPKFSSQTK EKLVSSEVRP VVEAVVVERL
GQWLEEHPQE ARKIIGKVVE AAAAREAARR ARELTRRKGA LDMASLPGKL ADCQNRDPAQ
SELFIVEGDS AGGSAKQGRD RGYQAILPLR GKILNVERAR FDKMLSSAEI GTLIAALGTG
IGKDDFDVGK ARYHKIIIMT DADVDGSHIR TLLLTFFFRQ MPEVVEKGYL YIAQPPLYRA
KRGNSEQYLK DDRELEDYLL DTGLDETVYT TAAGVQMAGP DLRALVERAR LARNAIAAMG
RKVPWVLLEQ AAVAGAFHTE IVNDDARASA AAADVARRID ALESPLERGW TGTLAAGGGM
VFQRTLRGVT ETHVIDPQVI HSTEARRLDS MAAALREFYE QPGRLRIKDG DQIIPGPMTL
INAVMAAGRK GIAIQRYKGL GEMNPEQLWE TTLDPNVRRL LQVKVNQVSD AEDVFSTLMG
DIVEPRRDFI QDNALNVQNL DV
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