Gene Rpic_4995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4995 
Symbol 
ID6289907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp48307 
End bp49134 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID642627389 
Productprotein of unknown function DUF932 
Protein accessionYP_001901355 
Protein GI187930869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0426401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.148352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACC TGTCGCTGCG CAATGCCAAC GTCGTGCGCT CCAAGACCCC GCTGGCCGAT 
GACGACATCC GCCGCGTTGC GCCCTCCATC TTCGCGGACG GCAAGCACGA AAGCCGCTCC
GATCGGTATA CCTACATTCC CACCATCGAC GTGCTGAACG GCCTGCGCAA GGAAGGTTTT
CAGCCGTACA TGGCAATGCA GACCCGCGTG CGCGACGATG GCAAGCGCGA ACACACCAAG
CACCTGTTGC GCCTGCGCCA TGTTGACCAC GTGGTCGACG TGGGGCAGGA GGTGAACGAA
ATCATCCTTT TGAATTCGCA CGATGGATCA AGCGCGTACC AGATGCGCGC CGGTGTGCAT
CGCTTCATCT GCTCCAACGG CTTGGTGGTC GGCGACGATT TCGCGGACAT CCGTATCCCG
CACAAGGGCA ACGTCATCGA TCAAGTCATC GAGGGCGCAT TCACTGTGCT CGATACCTTT
GAGAACGTGA ACACGCAGCG CGACGGCATG AAGGCGCTCA CGCTCGACAG TGGCGAGCAG
CAGGCTTTCG CGCGTGCCGC GCTCGCCTTC CGCTACGACG AGACGGTGGC ACCCGCACCC
ATCACCGACA CCGATCTGTT GAGCGTTCGC CGCATGGATG ATCGCGCGCC CGACCTGTGG
ACCACGTTCA ACCGCGTTCA GGAAAACATC ATCAAGGGCG GTGTGCGTGG CCGCAATGCG
ACCGGCAAGC GCGTTACCAC GCGCGCTGTG AACGGCATTG ACCAGGACAT CAAACTCAAT
CGCGCTCTGT GGGTGCTCGC TGAGGAAATG CGCAAGCTCA AGGCCTAG
 
Protein sequence
MSYLSLRNAN VVRSKTPLAD DDIRRVAPSI FADGKHESRS DRYTYIPTID VLNGLRKEGF 
QPYMAMQTRV RDDGKREHTK HLLRLRHVDH VVDVGQEVNE IILLNSHDGS SAYQMRAGVH
RFICSNGLVV GDDFADIRIP HKGNVIDQVI EGAFTVLDTF ENVNTQRDGM KALTLDSGEQ
QAFARAALAF RYDETVAPAP ITDTDLLSVR RMDDRAPDLW TTFNRVQENI IKGGVRGRNA
TGKRVTTRAV NGIDQDIKLN RALWVLAEEM RKLKA