Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4990 |
Symbol | |
ID | 6289903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010683 |
Strand | - |
Start bp | 42016 |
End bp | 43659 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642627385 |
Product | natural resistance-associated macrophage protein |
Protein accession | YP_001901351 |
Protein GI | 187930865 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0850771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0195368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATT TCGCTTCGGG CATCGACGCA CCACCGCGTC ATGCCGCGCT CGACGACGCC CACGTGGGTG ACATCCGCGG TGCACTCGGC ACCATCGCCC ACCATGACAC CGGCGCACGG GATAGCTGGC GTGCGCGTTT GCGGACGCTG CTCGCCATCC TCGGCCCCGG CCTGATCGTC ATGGTCGGCG ACAACGATGC CGGTGCCTTC GGCACCTACA CGCAGGCCGG GCAGAACTAC GGCACCACGC TGCTCTGGAC GTTGCTGTTG CTCATCCCTG TGCTTTACGT GAACCAGGAG ATGGTGCTGC GCCTGGGCGC CGTCACCCGT GTGGGCCATG CGCGGCTCAT CTTTGCGCGC TTCGGCAAGT TTTGGGGCAG CTTCTCCGTC ATCGATCTGT TTCTCGTGAA TGCGCTGACG CTGGTGACGG AGTTCATCGG CATCAGCCTC GCGCTGGAGT ACCTCGGCAT CCCGCGCCAT TGGGGCGTGT GTGCGGCGGC CGCGCTGGTG ATGCTGGCCG CGTCCACCGG AGACTTCCGC CGCTTCGAGC GCTTTGCGCT GGCGCTGGTG GCCGGCAGCC TCACGCTCAT TCCCGTGTTC GTGATGGTGC ATCCGCCGAT GGGGCAGGTG GCGCGCGACT TTTTCGTGCC TGCGCTGCCG ACCGGCGCAC CGCTGGCGGA GGTGATGCTG CTGATCATCG CCATCGTTGG GACGACGGTG GCGCCGTGGC AGTTGTTCTT CCAGCAGAGC TACGTGATCG ACAAGCGCAT CACCGCGCGC TTCATCCGCT ATGAGCGTGC GGACCTGTGG CTGGGCATCG TGCTGGTGAT TGCCGGAGCG GTGGCGATGA TCGCGTTCAG CGCGCAGGCC TTCCACGGCA CGCCCGCGTT CGGCAACTAC ACCGATGCGC TGGGTACGGC GAAAGGGTTG GAAGCCCATT CAGGCCGCTG GGCCGGGGTG CTGTTTGCGA TTGCGCTGCT GGATGCCAGC ATCATCGGCG CGTGCGCGGT GTCGTTGTCC ACGGCGTATG CGATTGGTGA TGTGTTTGCC GTGCGGCACT CGCTGCATCG CAAGCCGACG GAGGCCAAGG GCTTCTACGC GATCTACTTC GGGCTGACCT TGCTGGCTGC CGGCTTGGTG CTGACGCCTG GTGTACCGCT GGGGTTGCTG ACCAACGCGG TGCAGTCGCT GGCCGGTGTG CTGCTGCCAA GCGCGACGGT GTTTCTGCTG CTGTTGTGTA ACGACAAGGC CGTGCTCGGC CCATGGACGA ACGGCCGCGC CATGAACATC TTCACGGGCG GCGTGGTGGC GGTGCTGGTG ATGCTGTCCG TCATCCTCAC TGCGGCGGTG CTGTTTCCCG GCATTGGCGA GTTCGAGATC GGCGCGATCC TGGTGGGCGG TTCGCTCATC GCCATCGTCA TGTCGCTGGT GCTGTGGCGC ATCGAACGAA AAACCCGCCG GCCGCAGCAC CCGCAGCGCG TGAGCGTGCT GGACCGTGAT CGCTGGACGA TGCCGCCGCT GGAGCAATTG ACGCCGGCCC GCTGGACGCC GCTCAAGCGC ACGTGGATGT CTGTGCTGCG CGGCTACCTT GTGGTGGCGG CGGGGCTGGT GCTGGTGCGG ATTGCCGGAC TGCTGACAGG GTAA
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Protein sequence | MTHFASGIDA PPRHAALDDA HVGDIRGALG TIAHHDTGAR DSWRARLRTL LAILGPGLIV MVGDNDAGAF GTYTQAGQNY GTTLLWTLLL LIPVLYVNQE MVLRLGAVTR VGHARLIFAR FGKFWGSFSV IDLFLVNALT LVTEFIGISL ALEYLGIPRH WGVCAAAALV MLAASTGDFR RFERFALALV AGSLTLIPVF VMVHPPMGQV ARDFFVPALP TGAPLAEVML LIIAIVGTTV APWQLFFQQS YVIDKRITAR FIRYERADLW LGIVLVIAGA VAMIAFSAQA FHGTPAFGNY TDALGTAKGL EAHSGRWAGV LFAIALLDAS IIGACAVSLS TAYAIGDVFA VRHSLHRKPT EAKGFYAIYF GLTLLAAGLV LTPGVPLGLL TNAVQSLAGV LLPSATVFLL LLCNDKAVLG PWTNGRAMNI FTGGVVAVLV MLSVILTAAV LFPGIGEFEI GAILVGGSLI AIVMSLVLWR IERKTRRPQH PQRVSVLDRD RWTMPPLEQL TPARWTPLKR TWMSVLRGYL VVAAGLVLVR IAGLLTG
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