Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4983 |
Symbol | |
ID | 6289928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010683 |
Strand | - |
Start bp | 31998 |
End bp | 33605 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642627378 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001901344 |
Protein GI | 187930858 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0185741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCGC CAAAACCGGT CTCCGACGCG CCAGACGGGC GGCGCTTTGG AATCGCTTCA CCGTCGATCT TGCGCCCTAT CCGGGTGCGG CTGACGCTGG TGTTCGTGGT TTTTTTACTG TTGGTGGTTG GCGTCGGCGC TTTCAGTATC GACCAATTGG CGAGTTTCCA CAGCGTATCT GCGCAGATCA GCGGGCGCTG GCTTCAGAAC AGCCGAATTC TAGGGGACCT GAACAACTAC ATCTCGGATT ACCGCGCGGC CGAAGGCGAT TTTCTCATCG CCTCATCGCG CGCTGATCTG CGAGCCGCCG ACGAACAGGT CGCCATGCTC GACAAGTTGA TTGCCACGTC CCAGGCCCGC TACGACAAGA TCGAGCACGA TAGTGCCGAA CACGAGCTCT ACAGCCAGTT TGTCACCCAA TGGAATACGT ATCGTGAGCT CGCGAAACGG CTGATGATTA CTGCCAAGGC AGGCGACGTA GCGGGCGGTA CGCGGCTCTA CCACACGGAC TCCAAGCATG CATTCGACTT GGCCAACGAC ACACTGGGCG TGATGACCGA GCGCAGTGTC GCTGGCGCGG CAGCAGAAAC CGAGCGTGAG GCACAGGCCT ACCACGACGC GCGGCAACTC ATCATTGGGG CGATCGTAGT AGCGGCATGG CTGGTCGTGC TGGCTGTGAT CTACCTTGTC TACGCTGTGT CGCGGCCTAT TGCTGCGTTG GTCGATCGCA TGCACCACAT TGCCAACAAC GACACCCGGA TCGACATCCC TGGCTTGGAG CGCCACGACG AGATTGGCGA TATTGCGCAG GCCGTGGCGC GCTTTCGAGA AAACACAATC GAATTGGGAC GCAGCAAGGA TGCACTGATT GCCCAAGCCG CCGTATTGCA GGAGACGCTC GACAAGGAGC GTCGCATGGC CGAGCTGCAG CGCAATTTCG TCTCAATGGC TTCGCATGAA TTCCGCACAC CACTAGGCGT GATTGATGGT CAGGCCCAGC GGTTGATGCG CATGCGTGAC GCTTTGCCGC CTGAGACGCT GGAAGAGCGT TGCGGGAAAA TTCGCGCGGC GGTGCAGCGC ATGACGCACC TCATGGATCA CCTGCTCGAC TCTTCGCACT GGTTAGATTC CACGACGCCC GCAGCGATGC GGCGCACCGA TTTCCCGCTT GCGGCACTTT TGCACGAGGT TTGTGAGATG CACCGGGAAA GTACGCCAAG CGCACGGATC GACGAGTGCG TAGAGGCTGA TGAGCCGAAC ACATTCTTCG GCGATGCCCG GCTTCTGTTC CAGGCCTTCA GCAATCTTGT CGGCAACGCC GTCAAGTACT CACCGCCAGG CACACCGGTC AGTGTGCGTG TGCGCAGCGA TGCCGACGGT GTGTCGGTGA CGGTTGAAGA CCGGGGCATG GGCATACCCG AACGCGATAT CGAGCGTTTG TTCGAGCGCT ACGTGCGTGG GGGCAACGTT GCGGGGACGG TCGGGGCAGG TGTAGGGCTT TATTTGGTGA AGCTGGTAGT GGAACTGCAC CGAGGGACGA TCACCGTGAC CAGCGAAGAA GGCAAAGGCT CAACATTCAA CGTGTTCTTA CCCCGCCTGA AAAGCTAG
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Protein sequence | MHSPKPVSDA PDGRRFGIAS PSILRPIRVR LTLVFVVFLL LVVGVGAFSI DQLASFHSVS AQISGRWLQN SRILGDLNNY ISDYRAAEGD FLIASSRADL RAADEQVAML DKLIATSQAR YDKIEHDSAE HELYSQFVTQ WNTYRELAKR LMITAKAGDV AGGTRLYHTD SKHAFDLAND TLGVMTERSV AGAAAETERE AQAYHDARQL IIGAIVVAAW LVVLAVIYLV YAVSRPIAAL VDRMHHIANN DTRIDIPGLE RHDEIGDIAQ AVARFRENTI ELGRSKDALI AQAAVLQETL DKERRMAELQ RNFVSMASHE FRTPLGVIDG QAQRLMRMRD ALPPETLEER CGKIRAAVQR MTHLMDHLLD SSHWLDSTTP AAMRRTDFPL AALLHEVCEM HRESTPSARI DECVEADEPN TFFGDARLLF QAFSNLVGNA VKYSPPGTPV SVRVRSDADG VSVTVEDRGM GIPERDIERL FERYVRGGNV AGTVGAGVGL YLVKLVVELH RGTITVTSEE GKGSTFNVFL PRLKS
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