Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4981 |
Symbol | |
ID | 6289926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010683 |
Strand | - |
Start bp | 29989 |
End bp | 30636 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642627376 |
Product | TnsA endonuclease |
Protein accession | YP_001901342 |
Protein GI | 187930856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0242609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTGC GCCGGATCCC CAAGAATTTC CTCTTTGTCA CGGGACGACA CGCCTCTCCG CAGGCGGACG AGGTGGTTGA GTTCGAGTCG ATCTTGGAGA AGGAGTACAT GCTCCTGCTG GACTCGGATC CTTACCTCGA ATCGTACGAC GTCCAGCCTG TCGAAATTCC ACTGTCCCGT GGCCGAATTT ATGTCCCGGA CCTGCTGGTG ACATATCGTC CCACGCCTTC CGGAAATCTC CGACCACCTG AGCTGGTAGA GATCAAAACG CAAGAGCATC TGGATCGGTA CGCTGACAAA TACCGAGAGA AGTTCGCCGC GGCAGTGGTG TTTGCTGAAG AGCGAGGCTG GATCTTCGTT ACCCGAACAG AGCTGGATGT CAGGACGCCT CTTATCCAGA ACCTGAAATA TCTGCATCGA TATCGCCATA CGCCGGCAGA TCCGGTGGCA GTTGAACATC TACTTGAGGC GATGCGTCAA GAGGGGAGTC CGATGACGCC GGCAGCATTG CTCGGCTGTC TGACAGACAA CTTGGAGACG CGTGCAACGT GGATTCCCGT GCTTTGGCAT CTTGTGGCCC ATGGCGCAAT TCAAGCGGAT CTGCAGGTTC CGCTGTCGGA AAGCACGCCA CTATCTCTAC CGAGCTAG
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Protein sequence | MPVRRIPKNF LFVTGRHASP QADEVVEFES ILEKEYMLLL DSDPYLESYD VQPVEIPLSR GRIYVPDLLV TYRPTPSGNL RPPELVEIKT QEHLDRYADK YREKFAAAVV FAEERGWIFV TRTELDVRTP LIQNLKYLHR YRHTPADPVA VEHLLEAMRQ EGSPMTPAAL LGCLTDNLET RATWIPVLWH LVAHGAIQAD LQVPLSESTP LSLPS
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