Gene Rpic_4975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4975 
Symbol 
ID6289919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp22695 
End bp23567 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content57% 
IMG OID642627370 
Producthypothetical protein 
Protein accessionYP_001901336 
Protein GI187930850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.194568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGA GAAATCAATT GAACGCAGAT AAGCTAGTTG ATGAGTACCC AGATCCCTAT 
CCTGAGCTGC CAGTCGAGCG TGGCCCGCAT GGGCGTGGGG TTGGTAGGTG GGTTCCGGAT
GAGAAGCACC TCTACCTCAA ACAGTATCTT CATGCCACGC GTAAGGCCCA GGCGAAGTTC
AAGCAGCGGG TACTGATTGA TCCATTCTGC GGTCCTGGTC GCATTCAAGT TGTTGGCGAA
TCCTTTACCC GTAGTGGCGG CTCGGTAGTG GCGTACCGTC AATCCGCCGC CTCTGGCGCG
CCCTTCACAC GTGTCCTGAT CGGCGACATC GAAGCGGAGC GAGTGCGAGC AAATCAGTTG
CGCCTTGGTG CCGCCGGCGC CGCTGTACAG GGCTTCGTTG GGGCTGCGAC TGACACAGTC
GATGCCATGA TCAAGGCAGT TCCGTTCGGA GCGCTTGCTT TGGCCTACAT CGACCCTTAC
AACCTGGAGC ACTTGTCGTT CTCAATCATC GAGCGCCTAT CCAAACTGCA GCACGTGGAT
TTCGCCATCC ACTTCAGTCT GATGGATCTA ACGCGCAATA TTGATATGGA GCTGGATCCC
CAGCGGGATC GGTTCGACCA TGCTCTGCCT GGCTGGAGGT CCAGGGTGCC TACCGATGGG
TTGTCCAAGG CCAGCTTGCC GGGGTGGTTC TTTAACGCAT GGTGTGACGC GGTGCGGGGC
CTGGGTTTCA AGGTCAGTGT TCAGATGCCG AAGATTACCG ATGGTAACGG GCGGATCATC
TATCGAATGG TGTTCCTGTC CCGGCACGAG TTGCCAGACC GCATTTGGGA TGACATTGTT
CGCAGTCCTA ACCTGAACCT GTTCGATTCC TGA
 
Protein sequence
MPLRNQLNAD KLVDEYPDPY PELPVERGPH GRGVGRWVPD EKHLYLKQYL HATRKAQAKF 
KQRVLIDPFC GPGRIQVVGE SFTRSGGSVV AYRQSAASGA PFTRVLIGDI EAERVRANQL
RLGAAGAAVQ GFVGAATDTV DAMIKAVPFG ALALAYIDPY NLEHLSFSII ERLSKLQHVD
FAIHFSLMDL TRNIDMELDP QRDRFDHALP GWRSRVPTDG LSKASLPGWF FNAWCDAVRG
LGFKVSVQMP KITDGNGRII YRMVFLSRHE LPDRIWDDIV RSPNLNLFDS