Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4947 |
Symbol | |
ID | 6285078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1301274 |
End bp | 1302209 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619421 |
Product | malonate decarboxylase, epsilon subunit |
Protein accession | YP_001893456 |
Protein GI | 187927111 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.300822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.084962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC TCTTCATGTT TCCTGGCCAG GGGAGCCAAC GCGTGGGCAT GCTGCATACG CTGCCTGACG ACCCGGCCGT GGCACAAACA TTGAGCGAGG CGGGCGACGT GCTGAGCGTC GATCCGCTCA CGCTCGACAC CGCAGAGGCA TTGCGGTCGA CCGTGGCCGT GCAGCTCTGC CTGTTGATTG CCGGTGTGGC TGTGGCACGC ACGTTGGTTC GGCAGGATGC GGGGCCGGAC ATGGTGGCGG GCCTGTCGAT TGGCGCGTGG CCTGCAGCAG TCATTGCAGG CGTGCTGGAA TTCAGCGATG CGCTGTGTCT GGTATGCCTG CGCGGGCAAC TCATGGAAGA CGCGTACCCC AGCGGCTACG GCATGGCCGT CACGGCCGGA CTGACTGAAC CCGAGGTTGC CGCCATCGTG GCGCAGGTCA ACTCGGCCGC AACGCCAGCC TATGTCGCCA ACCTGAATGC GGAACGGCAG ATTGTCGTGG CGGGTAGCGA TGCGGCGCTC ACGCAAGTCA TGACGCGCGC GCATGCGGCG GGCGCATCGA CGGCAACGCG GCTGTGCATG GCAGTGCCGT CGCACTGTCC TCTACTTGAC GCACAGGCTG CCGAGCTGGC TACCGCCGCC GCAAAGGCCA CGGCCCACCC GCCACAACTC ACCTACGTCA GCAGCAGCCG GGCGCGTGCG CTATTCCGCG CAAACCTCAT CGTTGAAGAC CTGGCTTGGA ACATGGCCCG GCCAGTGCTG TGGCATGACT CGCTGCGGCA TGCGCTTGAG CGCGGCGCAC GGATGGCCGT GGAGATTGCG GGCAACGGTG CGCTGATGCG CCTCGCACAG CCCGTCTTTG CAAATGACGC GGTGCTGGAT GCGAGCAGTG GGCTCGATGC GGTGCGGGTG CGGATACAAC GCCAGCGGCG TTTGGACAGC CGATAG
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Protein sequence | MSVLFMFPGQ GSQRVGMLHT LPDDPAVAQT LSEAGDVLSV DPLTLDTAEA LRSTVAVQLC LLIAGVAVAR TLVRQDAGPD MVAGLSIGAW PAAVIAGVLE FSDALCLVCL RGQLMEDAYP SGYGMAVTAG LTEPEVAAIV AQVNSAATPA YVANLNAERQ IVVAGSDAAL TQVMTRAHAA GASTATRLCM AVPSHCPLLD AQAAELATAA AKATAHPPQL TYVSSSRARA LFRANLIVED LAWNMARPVL WHDSLRHALE RGARMAVEIA GNGALMRLAQ PVFANDAVLD ASSGLDAVRV RIQRQRRLDS R
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