| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4928 |
|---|
| Symbol | |
|---|
| ID | 6285843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 1278751 |
|---|
| End bp | 1279956 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642619404 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001893439 |
|---|
| Protein GI | 187927094 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.5477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCT ATATCTACGA CGCCGTGCGC ACCCCGCGCG GCAAGGGCAA GAAGGACGGC
AGCCTGCACG GCGTGACGCC GCTGCGCCTG GCCGCGACCG CACTGCGCGC CATCCGCGAT
CGCAATCAGC TCGACACGGC ACTCGTGGAC GACGTCGTGC TCGGCTGTGT TGAACCCGTG
GGCGAGCAAG GCGCGTGCAT CGGCCGCGTG GCAGTGCTGT CCGCCGGCTA TGCCGAGACG
ACGGCCGGGG TGCAGATCAA CCGCTTCTGC GCCTCGGGCC TCGAGGCCTG CAACATGGCC
GCTGCGCAGG TGATGGCCGG GCAAAGCGAC TTCGCCATCG GCGGCGGTGT GGAGAGCATG
TCGCGCGTGC CGATGGGCGC CAGCGGTGGC GCATGGCCGG TCGACCCGGC CGCCGCCATC
CCGCTGTACT TCGTGCCGCA AGGCGTGTCG GCCGACACCA TCGCCACCAA GTGGGGCTAC
AGCCGCCATG ACGTCGACGC CTATGCCGCA GAGAGCCACC GCCGCGCCCA TGCGGCCAGC
ACGGCGGGCT GGTTCACGGG TTCCATCGTG CCGGTGCGCG ACCAGAACGG CCTGACCATC
CTCGACCGCG ACGAGATGAT CCGCCCGCAG ACCACCGTGG ACACACTCGC GCAGCTCAAA
CCCTCGTTTG CGGAATTGGG CGAGCAATAC GGCTTTGACG CGGTGATCCG CCAGCGCTAT
CCGGAACTGG AACGCATCGA ACACGTGCAC CACGCGGGCA ACAGCTCGGG CATCGTCGAT
GGCGCCGCGG CCGTGCTGAT CGGCAGCCGC GAGGCCGGCA AGCGCGCGGG CCTCAAACCG
CGTGCGCGCA TCCGCAGCTT TGCGAGCATC GGTTCGGAGC CGTCGATCAT GTTGACGGGG
CCATCGTATG CAGCAGAGAA AGCACTCAAG CGCGCCGGCA TGTCGGCATC CGACATCGAC
CTGTACGAAC TCAACGAAGC CTTCGCCTCG GTCGTGCTGC GTTTCATGGA GGTACTGGCC
GTGCCGCATG ACCGCATCAA CGTCAACGGC GGCGCCATTG CGATGGGCCA TCCGCTCGGT
GCAACGGGCG CCATGATTCT CGGCACGCTG CTCGACGAGC TGGAGCGGCG TGGCGCAAGC
ACGGGCCTGG CCACGCTGTG CGTCGGTGCC GGCATGGGCA CCGCCACCAT CATCGAACGC
GTTTAA
|
|---|
| Protein sequence | MEAYIYDAVR TPRGKGKKDG SLHGVTPLRL AATALRAIRD RNQLDTALVD DVVLGCVEPV
GEQGACIGRV AVLSAGYAET TAGVQINRFC ASGLEACNMA AAQVMAGQSD FAIGGGVESM
SRVPMGASGG AWPVDPAAAI PLYFVPQGVS ADTIATKWGY SRHDVDAYAA ESHRRAHAAS
TAGWFTGSIV PVRDQNGLTI LDRDEMIRPQ TTVDTLAQLK PSFAELGEQY GFDAVIRQRY
PELERIEHVH HAGNSSGIVD GAAAVLIGSR EAGKRAGLKP RARIRSFASI GSEPSIMLTG
PSYAAEKALK RAGMSASDID LYELNEAFAS VVLRFMEVLA VPHDRINVNG GAIAMGHPLG
ATGAMILGTL LDELERRGAS TGLATLCVGA GMGTATIIER V
|
|---|
| |