| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4883 |
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| Symbol | |
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| ID | 6285414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1232258 |
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| End bp | 1233469 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642619359 |
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| Product | glycosyl transferase family 9 |
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| Protein accession | YP_001893394 |
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| Protein GI | 187927049 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase
[TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.734369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0526108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGG CCGGCATTCC CGATCGCCGC GCGGTGTGGG CGAACGCATC ACGCATCCTG
TGCGTGCGCC CCGACAACCT TGGCGACGTT GTGATGACCA CGCCTGCGTT CCACGCGCTC
AAGGCAGCCG CACGTGCCGA TGGCGCCCGC AGGCATCTGA CGCTGCTGAC GTCGCGTGCG
GGCGCCACCG CCGTGCCCCA CCTGTCGGAC ATCGATGACG TGATTGCCTG CGACGTCCCA
TGGGCCAAGC ACGCGAACGC CGCCGACGCC GATCAGACCG GTGCGCTGGT CGACACGCTG
GGCCAGGGCG CGTTTGACGC CGCGGTCATC TTTACCGTGC ACACACAGAA CCCACTGCCT
GCGGCCATGC TGTGCTTCCT CGCGGGTATT CCGCTGCGCC TAGCGCACTG CCGGGAGAAT
CCGTACGCGC TGCTGACGGA CTGGATTGCC GACGCCGATG CGCGCATCGC CGCGACTGCG
CCCGGCGACG TGCGCCACGA GGTGCGTCGC CAGCTGGACC TTGTGGCGCA GGTGACGGCG
GTGCCGCCGC ACCTTCCGCA CCGGCTGCGC TTCACGGTGC GACCCGCCGA CCGCGACACC
GTCCGTACAA AGCTCAGCGC ACGCGGCATC CGCCATGACG CCCCGTGGAT CGTGCTGCAT
CCGGGGGCGA CCGCCGCGTC GCGCCGCTAT CCACCCGACC GCTTTGCGCG CATTGCACGC
GCGCTGGCCG CGCGCTACGG CTGTCCGGTG CTCGTGACTG GCGCGCCGGC AGAGGCCGAG
CTGGTTCAGC AGGTGTGCAG GCCGGGGCTG GTGGCCGGGC AACCCGTGCT GGACCTGGCC
GGTGCGCTGA CGCTGGGCGA GTTGGCCGCG CTCATCGAGG GCGCGGCGCT GCTGGTCTCC
AACAACAGCG GCCCCGTGCA CCTGGCCGCC GCCACGCTTA CACCAGTGGT CGATCTGTAC
GCACTGACCA ACCCGCAGCA CACGCCGTGG GCCGTGCCCC ATGCAGTGCT CTCACACCAG
GTGCCGTGCC GCTATTGCTA CCGCAGCGTC TGTCCGCTCG GCCACCAGGC CTGTCTGACC
GGCGTGGCGG AAGATGACGT CATCGCCGCC GCACAGGGGT TGTGGCAGCC GACGCGCGTG
GCGCAGGCAC TGTGGCCCCA GCGCGCGTCG CCTGCCCCGT CTGCGACGGG CGCCATGACG
CCCGTCGCCT GA
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| Protein sequence | MSVAGIPDRR AVWANASRIL CVRPDNLGDV VMTTPAFHAL KAAARADGAR RHLTLLTSRA
GATAVPHLSD IDDVIACDVP WAKHANAADA DQTGALVDTL GQGAFDAAVI FTVHTQNPLP
AAMLCFLAGI PLRLAHCREN PYALLTDWIA DADARIAATA PGDVRHEVRR QLDLVAQVTA
VPPHLPHRLR FTVRPADRDT VRTKLSARGI RHDAPWIVLH PGATAASRRY PPDRFARIAR
ALAARYGCPV LVTGAPAEAE LVQQVCRPGL VAGQPVLDLA GALTLGELAA LIEGAALLVS
NNSGPVHLAA ATLTPVVDLY ALTNPQHTPW AVPHAVLSHQ VPCRYCYRSV CPLGHQACLT
GVAEDDVIAA AQGLWQPTRV AQALWPQRAS PAPSATGAMT PVA
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