| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4806 |
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| Symbol | |
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| ID | 6285501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1145298 |
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| End bp | 1147010 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619282 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001893317 |
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| Protein GI | 187926972 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.394772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.819099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGA ACCCCGCCAC CAAGTACCGC CCCTTCCCCG CTATCGCCCT CGCCGATCGC
ACCTGGCCCA ACAAGACCAT CACCCGTGCC CCGATCTGGA TGAGCACGGA CCTGCGCGAC
GGCAACCAGG CCCTGTTCGA GCCCATGAAC GCCGAGCGCA AGATGCGCAT GTTCAAGATG
CTCGTGCAGA TCGGCTTCAA GGAAATCGAA GCTGCTTTCC CCGCCGCCTC CCAGACCGAT
TTTGATTTTG TGCGCGAGCT GATCGAGGGT GGACACATCC CCGACGGCGT GGCCATCGAA
GTGCTGACGC AGGCGCGCGA AGACCTGATC CGCCGCACGA TGGAATCGCT GCGCGGCGCC
AAACGCGCCA TCATCCACGT CTACAACGCA ACCGCGCCGG TGTTCCGCCG CACGGTGTTC
AACACCGACC GCGAGGGCGT CAAGCGCATT GCCGTGCAAA GCGCCAAGCT GATCCGCGAG
ATTGCTCAGA CGATGCCCGA GACGCAGTGG ACGTACCAAT ACAGCCCCGA AGTCTTCAGC
GGCACCGAAC TGGATTTCGC GCTGGAGGTG TGCAACGCGG TGACCGAGGT CTGGGAGCCG
ACGCCCGAGC ACAAGATCAT CTTCAACCTG CCCGCCACGG TGGAGATGGC CACACCCAAC
ATCTACGCCG ACCAGATCGA ATGGATGCAC CGCAACCTGG CGCGCCGCGA TTCGATCATC
CTCTCCGTGC ATCCGCACAA TGACCGCGGC ACGGCCGTGG CAGCGGCTGA ACTGGCCGTG
ATGGCGGGCG CCGATCGCGT GGAAGGTTGC CTGTTCGGCA ACGGCGAGCG CACCGGCAAC
GTGGACATCG TCACGCTGGC GTTGAACCTG TATTCGCAGG GCGTGGATCC GGAGCTGGAT
TTCTCGCACA TCAATGACGT GGCACGGACC TGCGAAGACT GCACGCAGCT GCCGGTGCAC
CCGCGCCATC CGTACGTGGG CGACCTGGTG TTCACGGCGT TCTCGGGCTC GCACCAGGAC
GCCATCAAGA AGGGCTTTGC GGTGCAGAAA CCCGATGCGC CGTGGGAAAT GCCCTACCTG
CCCATCGACC CGGCCGACGT GGGCCGCACG TATGACTCGA TCATTCGCGT GAACAGCCAG
TCGGGCAAGG GCGGCATCGC GTATCTGCTG GAATCCGGCT ATGGCGTGGC GATGCCGCGC
CGCCTGCAGG TCGAGTTCAG CAGCACGGTG CAAAAGCTGA CCGATGCCAG TGGCCGCGAA
GCCACCGGCG CCGACATCTG GGCGCTGTTC CAGCAGACGT ACCTGCGCAG CGATGGTGCG
ATCGGCTACG TATCACACCG CCTGACCGAG CGCGACGATG GCAGCCAGCA CATCCGCCTG
GTCGTCAACA TCGACGATCA CGAGCATATT TGCGAAGGCA GCGGCAATGG CCCGCTCGAT
GCGCTGGTGC ATGCGCTGTC GCATGTGCTG ACCGCACCGG TCTCGATCCA TCACTACGAG
GAACGTGCGC TGGGCCAGGG CGCCAACGCC GATGCCATTG CGTTTGCGGA ACTGGCGGCA
ACAGGCGTGG CGGGCAGCGT GTTCGGCGTG GGCGTGGATG CGAACCTCAC GACCGCGTCG
ATTCGTGCCG TGGTGGGCGG GGTCAATCGC CTGATCGCAC GCACCGGCCA AGGCATGCTG
CGCCGCAGTA GTGCCCAGGC AACGGTAGCG TAA
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| Protein sequence | MLKNPATKYR PFPAIALADR TWPNKTITRA PIWMSTDLRD GNQALFEPMN AERKMRMFKM
LVQIGFKEIE AAFPAASQTD FDFVRELIEG GHIPDGVAIE VLTQAREDLI RRTMESLRGA
KRAIIHVYNA TAPVFRRTVF NTDREGVKRI AVQSAKLIRE IAQTMPETQW TYQYSPEVFS
GTELDFALEV CNAVTEVWEP TPEHKIIFNL PATVEMATPN IYADQIEWMH RNLARRDSII
LSVHPHNDRG TAVAAAELAV MAGADRVEGC LFGNGERTGN VDIVTLALNL YSQGVDPELD
FSHINDVART CEDCTQLPVH PRHPYVGDLV FTAFSGSHQD AIKKGFAVQK PDAPWEMPYL
PIDPADVGRT YDSIIRVNSQ SGKGGIAYLL ESGYGVAMPR RLQVEFSSTV QKLTDASGRE
ATGADIWALF QQTYLRSDGA IGYVSHRLTE RDDGSQHIRL VVNIDDHEHI CEGSGNGPLD
ALVHALSHVL TAPVSIHHYE ERALGQGANA DAIAFAELAA TGVAGSVFGV GVDANLTTAS
IRAVVGGVNR LIARTGQGML RRSSAQATVA
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