Gene Rpic_4733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4733 
Symbol 
ID6285204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1074186 
End bp1075286 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID642619209 
Productglycosyl transferase family 2 
Protein accessionYP_001893244 
Protein GI187926899 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.114936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAC ACGCAAAACA CCGGGCCAAG CCTGATATCG CCCTGGTGGT CATCGCCCGC 
GATGAGGCGG CCTGCATCGA GCGCTGCCTG CTGAGCGCCA AGCCCCACGT CGATCGGATG
ATCGTGCTGG ACACCGGCTC GACCGACGAC ACCGTGGCGA TTGCCAAGGC GTGCGGCGCC
CAGGTGCACC ATTTCAAGTG GGTGGACGAT TTCTCGGCGG CGCGCAACGC TGCGCTGGCA
GCGGCCAACG CCGACTGGAA CCTCGTGCTC GACGCCGACG AATGGATCGA AAGCGGCGCG
GAAGAGCTGC GCAGTGCCTG CACGTTCGGG CCGCTGCTGG GCGTGGTCTG CATCCGCAGC
GAGTTCGACG TGTCGGGCCC GGTGGAGCAC TCCAATAGCT GGATCGCCCG CCTGCTGCCG
CGTGGCGTGC GCTACAAGGG CCGCATCCAC GAGCAGCCCG CCGCCAACCT GCAGCGTGTG
CGCCTGCCCC TGGTGCTCGG CCACGACGGT TACATGACCG CCAAGCTCGA CAAGAAGCGC
GGGCGCAACC ACACCCTCCT GCAACTGGAA CTGGCCGCAC ACCGGGACGA CCCATATGTG
CTCTACCAGC TCGGCAAGGA CTTCGAGATC AACCAGAAAG ACCCGACCCA GGCTGCCGCC
CACTACGAGC AGGCGCTCGC CAAGGCTCCA AAGCAAGTGC CCTATCGACA CGATCTCTGC
ATCTGCCTGC TGGCCTGCCT GAGCAAGTCC GGGCAACTCG ACCGCGCCAT CACCCTGGCA
GGCGAGTGGA TGGAGGAGTG GTCGGGCTCG CCGGACTACT TCTACATGCT GGGCCATCTG
ATGTTCGAAG CCGCGGCCAA GGACCCGGCA CAGGCCGAAA AGCAATGGCT GCCGATGGCG
GAGAACGCCT TCCTGAAGTG CCTGGAGATT GGCGAGCAGC CCAAGCTGGA CGCTGCCGTG
TTCGGGCGCG GCAGTTTTGC CGCCGCTAAG TACCTGGCGC TGACCTATCG CGCCCTGGCC
GACACACTGG CCATCAAGTC GAACCAATAT TCCGACCTCG CGCGGCAGAT GCAGGAACGC
AGCGCGGTCG CCGCCGCATG A
 
Protein sequence
MSKHAKHRAK PDIALVVIAR DEAACIERCL LSAKPHVDRM IVLDTGSTDD TVAIAKACGA 
QVHHFKWVDD FSAARNAALA AANADWNLVL DADEWIESGA EELRSACTFG PLLGVVCIRS
EFDVSGPVEH SNSWIARLLP RGVRYKGRIH EQPAANLQRV RLPLVLGHDG YMTAKLDKKR
GRNHTLLQLE LAAHRDDPYV LYQLGKDFEI NQKDPTQAAA HYEQALAKAP KQVPYRHDLC
ICLLACLSKS GQLDRAITLA GEWMEEWSGS PDYFYMLGHL MFEAAAKDPA QAEKQWLPMA
ENAFLKCLEI GEQPKLDAAV FGRGSFAAAK YLALTYRALA DTLAIKSNQY SDLARQMQER
SAVAAA