Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4715 |
Symbol | |
ID | 6285135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1057608 |
End bp | 1058525 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619191 |
Product | beta-lactamase domain protein |
Protein accession | YP_001893226 |
Protein GI | 187926881 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.515009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00436912 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCGCCA CCCACGCCCG CACGAAGATC GAACGCGCAG ACTTCGGGCG TGTATCGGTC TTCTTTGGCG AGAAGAACGG CAAGTACCCC GATGGCAACC AGGTGCTCAT TCGCGGCGCG GACACTCGCG CCGCCTTTGA CACGCCGGTC GTCTCCAACC ACATCGGCGC CGAGTTCGAC GCCACCGAAC TCGTGGTGAT GGGCCACGTG CACGAAGACC ACATGGCGGG CCTGCACCGC TTGCCGCGCG CGCGCGTGTA CGCGCACGAG GCCGACGTGC CGGCACTGCG GAGTTGGGAA GGCATGGTCG ACACGTACGG CCTTGATGAC GCACTCGCGC CGCGCATGCT GGAGAAACTC CAACGGGAGT TCTTCTATAC GCCGCGCCCC GATGCGCACG GGTACGTGGA TGGCGCGTCG TGGGATCTTG GCCAGACGCA GGTCCGTGCG CTCCACTTTC CGGGTCACAC GGCGGGCCAC AGCGTGCTGC TGATCGAGCC AGAGGCAGTG GCATTCATTG GCGACATCGA TCTGACAGGC TTTGGCCCCT ACTATGGCGA TGCCTGTTCG AGCCTGCACG ACTTCCGTCG CAGCCTTGCA AGGCTGCACG AGATCCCCGC CAAGGTGTGG GTCACCTCGC ACCATCGCGG CATCTACACC GACCGGGAAT CCTTCCTGCG CGATCTCGCC GCCTACACCG CCAAGCTGAG CGAGCATGAA GCGCGCCTGC TGGCCATGCT CGAGGAATCG CCCAAGACGC TGGCGCAACT GGTTGAGCAG CGGTTGCTGT ATCCGCCGGG CTACCAGAAT GTGTGGGTGG AGGGCGCGGA GCGCAGAACG ATCTTGCAGC ACCTGGCCGA GTTGCTCGCG CAAGGGCGGG TCCTGCAGGA CGACCAAGGC GCCTATCGGG TGGCTTGA
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Protein sequence | MTATHARTKI ERADFGRVSV FFGEKNGKYP DGNQVLIRGA DTRAAFDTPV VSNHIGAEFD ATELVVMGHV HEDHMAGLHR LPRARVYAHE ADVPALRSWE GMVDTYGLDD ALAPRMLEKL QREFFYTPRP DAHGYVDGAS WDLGQTQVRA LHFPGHTAGH SVLLIEPEAV AFIGDIDLTG FGPYYGDACS SLHDFRRSLA RLHEIPAKVW VTSHHRGIYT DRESFLRDLA AYTAKLSEHE ARLLAMLEES PKTLAQLVEQ RLLYPPGYQN VWVEGAERRT ILQHLAELLA QGRVLQDDQG AYRVA
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