| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4714 |
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| Symbol | |
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| ID | 6285099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1056771 |
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| End bp | 1057535 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619190 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001893225 |
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| Protein GI | 187926880 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0274692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00406557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTACCA ACCTGTTCGA CCTGACCGGC AAGATCGCCC TGGTGACGGG CGCAAGCCGC
GGCATCGGCG AGGAAATCGC CAAACTGCTA GCCGAGCAAG GCGCGCACGT CATCGTATCG
AGCCGCAAGC TGGCGGACTG CCAGGCCGTG GCCGACAGCA TCCGCGAAGC CGGTGGCAAG
GCCGAGGCGC TGGCGTGCCA CGTCGGCCGC ATGGAAGACA TCGAGGCCAC CTTTGCACAT
ATCCGCAACA CGCATGGCCG GCTGAACATT CTGGTCAACA ACGCTGCGGC CAATCCGTAC
TACGGCCATA TCCTCGACAC CGACCTCGCC GCCTTTGAAA AGACCGTCGA CGTGAACATC
CGCGGCTATT TCTTCATGTC GGTCGAAGCC GGCAAGATGA TGCGGGCGCA GGGGGGCGGC
GCCATCGTCA ACACTGCATC CGTCAACGCG CTGCAGCCGG GCGACAAGCA AGGCATCTAC
TCGATCACCA AGGCCGCCGT GGTCAACATG ACCCGTGCGT TCGCCAAGGA ATGCGGGCCG
CTCGGCATCC GCGTGAACGC GCTGCTGCCA GGCCTGACCA AGACCAAGTT CGCAGGCGCA
CTGTTCGAAG ACAAGGCCAC CTACGATCGC TGGATCAGCG AGATCCCGCT GCGCCGCCAT
GCCGAGCCGC GCGAGATGGC CGGCACGGTG CTCTATCTGG TTTCTGATGC CGCGAGCTAC
ACGAACGGCG AGTGCATCGT CGTGGATGGC GGCATCACGA TCTGA
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| Protein sequence | MSTNLFDLTG KIALVTGASR GIGEEIAKLL AEQGAHVIVS SRKLADCQAV ADSIREAGGK
AEALACHVGR MEDIEATFAH IRNTHGRLNI LVNNAAANPY YGHILDTDLA AFEKTVDVNI
RGYFFMSVEA GKMMRAQGGG AIVNTASVNA LQPGDKQGIY SITKAAVVNM TRAFAKECGP
LGIRVNALLP GLTKTKFAGA LFEDKATYDR WISEIPLRRH AEPREMAGTV LYLVSDAASY
TNGECIVVDG GITI
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