Gene Rpic_4707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4707 
Symbol 
ID6285120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1050910 
End bp1051689 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID642619183 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001893218 
Protein GI187926873 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.287025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00358317 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGACC ACATCCACAG CCGCCACGCC AATGGCGTGC TGACCCTGAC CCTCGCGCGC 
GCCGACAAGA AGAACGCCAT CACCGACGCC ATGTACGGCG CACTGGCCGA TGCGCTGGAC
GCCGCCGAGC GCGACAACGC CGTGCGCGTG GTGCTGCTGC GCGCCGAGGG CGACATGTTC
TCGGCCGGCA ACGACATCGG CGAATTCGCA TCGATTGCCA TGACCGGCGG CAAGGGCGGC
GGGGAGCGCA ACGTCATCCG CTTCCTGCAC GCGCTGGCCC GTGCCACACG CCCTCTGGTG
GCGGCAGTCC AGGGCCGCGC GGTCGGTATT GGCACGACCA TGCTGCTGCA TTGCGATTTC
GTGCTGCTGG CCGACAACGC GCAGCTCTCT ACGCCGTTCG TCAATCTTGC GCTGGTGCCG
GAGGCGGCAT CGAGCCTGCT CATGCCGGCG CGGCTGGGCC ATGTGCGCGC GTTCGAGATG
TTCGCCCTGG GCGATGCAGT GAGCGCGCAA TCGGCGCTGA TGTGGGGATT GGCAAACCGC
GTGGTGCCAC TCGACAGGCT CGGTGAAGAA GCGCAGGCCA TTGCGCAGCG CCTGGCGCGC
CAGCCGCTCG GTGCATTGAC TGAAACCAAG CGCCTGATGC GCGATGCAGA GCTGCTCAAG
CAGCAGATGG ACGCCGAGAG CGCATGCTTT GCGCGCCGGC TGCAGTCGCC TGAGGCGCAC
GAAGCGTTCC GGGCGTTCGT GGATCGACGG CCGCCCGATT TCAACGCCGT GGCGCACTGA
 
Protein sequence
MSDHIHSRHA NGVLTLTLAR ADKKNAITDA MYGALADALD AAERDNAVRV VLLRAEGDMF 
SAGNDIGEFA SIAMTGGKGG GERNVIRFLH ALARATRPLV AAVQGRAVGI GTTMLLHCDF
VLLADNAQLS TPFVNLALVP EAASSLLMPA RLGHVRAFEM FALGDAVSAQ SALMWGLANR
VVPLDRLGEE AQAIAQRLAR QPLGALTETK RLMRDAELLK QQMDAESACF ARRLQSPEAH
EAFRAFVDRR PPDFNAVAH