Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4707 |
Symbol | |
ID | 6285120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1050910 |
End bp | 1051689 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642619183 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_001893218 |
Protein GI | 187926873 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.287025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00358317 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGTGACC ACATCCACAG CCGCCACGCC AATGGCGTGC TGACCCTGAC CCTCGCGCGC GCCGACAAGA AGAACGCCAT CACCGACGCC ATGTACGGCG CACTGGCCGA TGCGCTGGAC GCCGCCGAGC GCGACAACGC CGTGCGCGTG GTGCTGCTGC GCGCCGAGGG CGACATGTTC TCGGCCGGCA ACGACATCGG CGAATTCGCA TCGATTGCCA TGACCGGCGG CAAGGGCGGC GGGGAGCGCA ACGTCATCCG CTTCCTGCAC GCGCTGGCCC GTGCCACACG CCCTCTGGTG GCGGCAGTCC AGGGCCGCGC GGTCGGTATT GGCACGACCA TGCTGCTGCA TTGCGATTTC GTGCTGCTGG CCGACAACGC GCAGCTCTCT ACGCCGTTCG TCAATCTTGC GCTGGTGCCG GAGGCGGCAT CGAGCCTGCT CATGCCGGCG CGGCTGGGCC ATGTGCGCGC GTTCGAGATG TTCGCCCTGG GCGATGCAGT GAGCGCGCAA TCGGCGCTGA TGTGGGGATT GGCAAACCGC GTGGTGCCAC TCGACAGGCT CGGTGAAGAA GCGCAGGCCA TTGCGCAGCG CCTGGCGCGC CAGCCGCTCG GTGCATTGAC TGAAACCAAG CGCCTGATGC GCGATGCAGA GCTGCTCAAG CAGCAGATGG ACGCCGAGAG CGCATGCTTT GCGCGCCGGC TGCAGTCGCC TGAGGCGCAC GAAGCGTTCC GGGCGTTCGT GGATCGACGG CCGCCCGATT TCAACGCCGT GGCGCACTGA
|
Protein sequence | MSDHIHSRHA NGVLTLTLAR ADKKNAITDA MYGALADALD AAERDNAVRV VLLRAEGDMF SAGNDIGEFA SIAMTGGKGG GERNVIRFLH ALARATRPLV AAVQGRAVGI GTTMLLHCDF VLLADNAQLS TPFVNLALVP EAASSLLMPA RLGHVRAFEM FALGDAVSAQ SALMWGLANR VVPLDRLGEE AQAIAQRLAR QPLGALTETK RLMRDAELLK QQMDAESACF ARRLQSPEAH EAFRAFVDRR PPDFNAVAH
|
| |