Gene Rpic_4686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4686 
Symbol 
ID6285050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1024341 
End bp1025837 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content67% 
IMG OID642619163 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001893198 
Protein GI187926853 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.226559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTTG CCGTTCCGGC GATCCTGCGG GTCCGGTCGT TATCGTTCCG GCTCTATGTG 
CTGATCCTGT TGGCGCTCGT GCTGATGCTG CTGGTGCAAC TGGTGATCGC ACACCTGGAG
ATTTCGCGCA CCAACAGCCG ACAAGTGGTG AGCGATCTGC GCATGTCGGC CCAGGCCTAT
GCAGACCTGA CCACGCTCAA CATGGACGAC GTGCCGCGCC GCGAAGAATT CCTGCGCCGC
CTCACCAACA TCAAGCTGGG CTTGTCACTA CCCAACATCC TCCCGGGCGA ATTCCGCTAC
GTGCTGTGCG ACCGCGCCGG TAACGTCGTC ACGGCCTTCC CCGGCGCACC GACCATGCCG
TGCGGCAAGG TGCAGGGCGC GGTGGTCGAG GTCATGCTGG AAGGCAAACC GTGGCGCAGC
TACACGGTCG AGAGCATCGA CGGCAAGATC ACCGCCACGG TGGCGCAGCC GCTGTCCGCC
TATGAGCGCG CCATTCGCGA CCTCTTTCAG GAAGTGGCGA TTGCACTGGC CATCCTGGCC
AGCGCGCTGA TGGTGATGGT GGGGTGGGCG GCCCATCAGG GCCTCAAGCC GCTGCGTACC
CTGACACGGC AAGTCGAGTC GCGCGACTCG GCCGATCTCG ACCCCGTGCA GAGCGTCGAA
CATGCCGAAC TGAAACCGCT GGTAGATGCC CTCAACGGGC TCTTCGCCCG GGTGCGCCGC
GGCATCGAAG CCGACCGACG GTTCTTTGCC GATGCCGCGC ATGAGTTGCG CACGCCGCTG
GCTGCGATCC AGGCGCAGGC GTATGTGGTA TCGCACTCGG ATAGCGAAGA CGACCGGTCT
ACGGCGCTGC GCGAGTTCGA TCGCGGCATC TCGCGCGCGA CCCAGTCGCT GGCCAAGCTG
CTTGCCATCG CGCGGCTCGA TGCGCGACGC GTCGAGGCGC AACTGGCGCA GGGCGCGCTG
TCCGATCTCG CGGGGTGCGC CCGCAGCGGC GTCATCCAGC AGGCCTCACG CGCCGAGCGG
CGCAACATCA CGTTGTCCTA CGAGGGCGCC AGCCAGGCCT GGGTCGCGGT GTCGCACGAA
GACGCCGCCA CGCTGGTCGA GAACGTCCTT GACAATGCCG TGCGTGAAAC GCCCGAGGGC
GGTGAGGTGC GCGTAGCCGT CAGGCGCATC GAGCGGGGTG GGCCGGGTGG TGCACCCATG
GTCGAGCTTC GCGTCGAGGA TACCGGCCCT GGTATCCCGC CCGACGAGCG CGAGCGCGTG
TTCGAACGCT TCTATCGGCC GCGCGAGAGC CAATCGCAGG GCAGTGGCCT GGGACTCGCG
ATCGTGCGGC GGATTGTCGA GCTCGGCAAT GGTTCCGTGG CGATCGAGGA TGGCCTTGCA
CATGCGCACG GCAGGGGCTG CGCGATCGTG ATCCGCCTGC CTGCGCTGGA CAGCACGCCC
GAGCCGATCG AGCCCGATGA CGCGCCGCCC GGCATGACCG ACTCGCCTGC ACAATGA
 
Protein sequence
MKLAVPAILR VRSLSFRLYV LILLALVLML LVQLVIAHLE ISRTNSRQVV SDLRMSAQAY 
ADLTTLNMDD VPRREEFLRR LTNIKLGLSL PNILPGEFRY VLCDRAGNVV TAFPGAPTMP
CGKVQGAVVE VMLEGKPWRS YTVESIDGKI TATVAQPLSA YERAIRDLFQ EVAIALAILA
SALMVMVGWA AHQGLKPLRT LTRQVESRDS ADLDPVQSVE HAELKPLVDA LNGLFARVRR
GIEADRRFFA DAAHELRTPL AAIQAQAYVV SHSDSEDDRS TALREFDRGI SRATQSLAKL
LAIARLDARR VEAQLAQGAL SDLAGCARSG VIQQASRAER RNITLSYEGA SQAWVAVSHE
DAATLVENVL DNAVRETPEG GEVRVAVRRI ERGGPGGAPM VELRVEDTGP GIPPDERERV
FERFYRPRES QSQGSGLGLA IVRRIVELGN GSVAIEDGLA HAHGRGCAIV IRLPALDSTP
EPIEPDDAPP GMTDSPAQ