Gene Rpic_4660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4660 
Symbol 
ID6284920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp990801 
End bp991478 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID642619137 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001893172 
Protein GI187926827 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA CTCTCGATAT TGGCAACCTG CTCAAGCACA CCCGGTTGTT CGAGGACTTT 
GACGCCGACG ACATGGCGGT CCTCGCACGC GATTGCCGCA CACAGCGCGT TGCACGTCAC
GATATTGTTT TCAACCGCGG CGACCATGCC GACGGCTTCT ATGTGGTAGC GGTAGGCGCG
ATCAAACTCG TGCTGCCCGG TCCGCATGGA CAGCGCAAGG TCATCGAATT CTTTGGTCCG
GGCCAGTGTT TTGGCGAGCC GTTCATGTTC ATCAACCGGC CGTATGCAGC CGATGCCCAG
GCCATGGAAG ACAGCCTGCT CGTCTGGATC GGCAAGCCGG CCATCGACGC TGCGCTCGAC
GTGCATCCGC ACCTGGCGCG GCAGATGCTT GCGGGTCTGT CTGCCCGGCT GCACACCCTG
ATGTGCGACA TCGAAACGGT CAAGCTGCAA AGCGCAAACG AACGGCTGGT CGGCTATCTG
CTCTCGCTGC CGCGCAAGTT CGACCGGACG CGTTTTCCGT GCAGCAAGAG CCTGGTGGCG
TCCAAGCTCG GGCTGGCACC CGCCACGCTC TCGCGCGTGC TGCGTCAATT GATTCAGGAC
GGACTCATCC TGGTCGAGGG GCGGGATGTC GTCATCCCCA ACTCCGTGGC GCTTGAGCGC
CAACTGCAGG CCGCATAG
 
Protein sequence
MAETLDIGNL LKHTRLFEDF DADDMAVLAR DCRTQRVARH DIVFNRGDHA DGFYVVAVGA 
IKLVLPGPHG QRKVIEFFGP GQCFGEPFMF INRPYAADAQ AMEDSLLVWI GKPAIDAALD
VHPHLARQML AGLSARLHTL MCDIETVKLQ SANERLVGYL LSLPRKFDRT RFPCSKSLVA
SKLGLAPATL SRVLRQLIQD GLILVEGRDV VIPNSVALER QLQAA