Gene Rpic_4650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4650 
Symbol 
ID6285130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp979488 
End bp980888 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content61% 
IMG OID642619127 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001893162 
Protein GI187926817 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC GGACGAATCC TGTTCCAGAT GCCGGTCTGA AACGCCTGAC CTCGCGTGCC 
ATCACGTTAA TGGACTGGAT ACTTGCCCCT GCAGTGATTG CCGGTTTGCT CGGGGCTTAT
CTGCAGTTGG AGCAGTGGAT TATTTCCGCC AATGGTTGGT GGGCCTTCAT TTTCATCTCG
ATACCGGTCG GCGCCGTGTC GTACAGCTAC GCACATTATC TGGAGGAAAT CCGGGGCCTT
GTTGCTTCGG CATGCCAGAG TGCGCAGCGG GTGGAGCGCA ATCGTCACCG CCTTGAGGGA
ATCATCCGTG CCTCGATGGA GGCGATCATC ACGATCGACG AGTCGCAGCG CATTGTCCTG
TTCAATCCGA GGGCCGAGGG CTTATTTGGA TACCGCGCCG AAGACGTGCT TGGCGCCCCC
ATTGAACAAT TGATCCCGCA GCGTTTTCGT GAGGCTCATC GGAAGCTGGT GCAGCGCTTT
GGCGTGACGC CCTCGAGCGA GCGCAGGATG GCGGGCCAGC GGGAAGTGTT TGCGCTGCAT
GCCGACGGCC ACGAGTTCCC GATCGAGGCG TCCATCTCGC ATTCGGAAGA AGACGGGAAG
AAGCTGTACA CGATCATGCT GCGCGACATC ACGGAGCGCC TGAAGGCTGC CAAGGCATTG
AGCCGCTCGC AGGAGGAGCT TCGCTACCTT GCGGACTCCA TCCTCGTCGT GCGCGAGGAA
GAGCAGCGGC GCATTGCGGA CGGGCTCAAC CAGAGCCTCG GACGTCGGTT GAATACGCTG
CATGAAGACT GTGCAGCGCT GTCCGCGCAG CTTCGGTGGG CAGGGCACGT TCAATGTAAA
GACGGTCTGG CTGGCATTCA GGCAAATATT GACGCAGCAG AGATCTCCCT CCGGCGCATC
TGCATGGACC TCCGCCCACA GGTGCTGGAT GAGCTTGGCC TGGTGCCGGC TGTGCATTGG
ATGGTCACGG ACTTCGAGGC GCGCTATCAG ATTCCGGTCA CACTCGACGT GGAGCCGATT
GATTTTGATG GGCGCACGGC CAATGCGCTG TTCCGCATCA TTCAGGAAGC GTTGACCAAC
GTTGTCAGGC ACGCACACGC AACAGCGGTC AGGATCCGCC TGCGGAAAAC GGGTGCCACG
TGCGAGGTGA GCATCGTCGA CAACGGCGTG CACAGCCCGT CGCTGGCGCT GCCTTGCGCG
CGCTCCGGCC TCGGCCTGAT CGGTATTCGC GAGCGCGCGC GCCTGCTGGG TGGCGCTGCA
CAGACTGAAC AGGAGGATGG CACCGGCTTT CGGGTGAGGG TGGTGTTTCC ACTGCACAAG
CGCATGGCGC ACGCGCTCGA CAGCCTATGC AGCGAGTCCG GCGAAAACCC GCGGCACTCC
ATCGACGAAC TGGATGCATG A
 
Protein sequence
MSKRTNPVPD AGLKRLTSRA ITLMDWILAP AVIAGLLGAY LQLEQWIISA NGWWAFIFIS 
IPVGAVSYSY AHYLEEIRGL VASACQSAQR VERNRHRLEG IIRASMEAII TIDESQRIVL
FNPRAEGLFG YRAEDVLGAP IEQLIPQRFR EAHRKLVQRF GVTPSSERRM AGQREVFALH
ADGHEFPIEA SISHSEEDGK KLYTIMLRDI TERLKAAKAL SRSQEELRYL ADSILVVREE
EQRRIADGLN QSLGRRLNTL HEDCAALSAQ LRWAGHVQCK DGLAGIQANI DAAEISLRRI
CMDLRPQVLD ELGLVPAVHW MVTDFEARYQ IPVTLDVEPI DFDGRTANAL FRIIQEALTN
VVRHAHATAV RIRLRKTGAT CEVSIVDNGV HSPSLALPCA RSGLGLIGIR ERARLLGGAA
QTEQEDGTGF RVRVVFPLHK RMAHALDSLC SESGENPRHS IDELDA