Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4568 |
Symbol | |
ID | 6285691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 900389 |
End bp | 901837 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619048 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_001893084 |
Protein GI | 187926739 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.411532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCACG GCATCGACGA ACGCAGGCGC TGGCTTGCCC TCATCGTGCT CTGTCTGGGC GTCCTGATGA TCGTGTTGGA TACGACCATC GTGAACGTCG CGCTGCCGTC CATCCGCGCG GATCTGGGCT TTACCGAAAC GTCGCTGGTG TGGGTGGTCA ACGCCTACAT GCTCACATTC GGCGGCTTCC TGCTGCTGGG TGGTCGCCTT GGTGACCTGT TCGGGCACCG CAGGCTGTTC CTGGCGGGCA TCACGTTGTT CACGTTGGCG TCTGCGGCAT GCGGGCTGGC CAATGCGCAG GGGCTGCTGA TCACGGCGCG TGCCGTGCAG GGTCTGGGTG GTGCGGTGGT ATCGGCGGTG TCGCTGTCGC TCATCATGAA TCTGTTTACC TCACCGTCAG ATCGCGCCAA GGCGATGGGC ATCTACGGAT TCGTATGCGC AGGTGGCGGC AGCATCGGCG TGCTGCTGGG TGGGCTGCTG ACCAGCGCAT TGAGCTGGCA CTGGATCTTC CTGGTCAACC TGCCGATCGG CGTCGCGGTC TATGCCGCCT GCGTGGCGCT GCTGCCGGCG GGGCAACCGC AGGCCACTCG CGCCAGGCTC GATGTGGCGG GTGCCATTAC CGTCACAGCC TCGCTGATGC TGGCGGTCTA CGCCATCGTG CATGGCAACG AAGCGGGCTG GACGTCCACG CCAACCCTTG GCCAACTGGC GATGGCCGTC GCGCTGATGA TGGCGTTCCT CATCATCGAA TCGCGTGTCC CGCATCCGCT GATGCCGCTG CGCATGTTCG CGCTGCGCAA TGTGGCGACG GCAAATGTGG TCGGCGTGCT GTGGGCCGCG GCGATGTTTG CGTGGTTCTT CATCTCGGCC CTCTACATGC AGCGTGTGCT GCACTACAGC GCCATGCAGG TGGGGCTGGC GTTCCTGCCG GCCAACATCA TCATGGCAGT GTTCTCGCTG GGGCTGTCGG CCAAGCTTGT GATGCGCTTC GGGATTCGCG CGCCCCTGTC GATCGGGTTG CTGATGGCGG CGCTCGGGCT CGCGCTGTTC GCGCGTGCGC CCGCCGGCGG CGGCTTCCTG TTGGACGTGC TGCCGGGCAT GGTGCTGCTG GGCCTGGGCG CGGGCGTAGC GTTCAATCCG GTGCTGCTGG CTGCCATGAG CGATGTGGCG CCGGATGAGT CGGGCCTCGC TTCAGGCGTG GTCAACACGT CGTTCATGAT GGGCGGTGCG CTGGGCCTGG CCATTCTGGC GAGCCTGGCT GCGGCACGCA CCGAAAGTCT GGCGGGCGCA AATGCCGATG CCGTCACGGC GCTCAATGGC GGTTATCACC TGGCGTTCAT GCTGGGTGCG GGGGCCGCGG TGCTTGCGTC GGTGCTGGCG GCCGTGTTCG TGCGCACCCG GGCCCACGGA CCGGCACAGG GCGACGCGCC GTCCCCGGCT TCAATCTGA
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Protein sequence | MMHGIDERRR WLALIVLCLG VLMIVLDTTI VNVALPSIRA DLGFTETSLV WVVNAYMLTF GGFLLLGGRL GDLFGHRRLF LAGITLFTLA SAACGLANAQ GLLITARAVQ GLGGAVVSAV SLSLIMNLFT SPSDRAKAMG IYGFVCAGGG SIGVLLGGLL TSALSWHWIF LVNLPIGVAV YAACVALLPA GQPQATRARL DVAGAITVTA SLMLAVYAIV HGNEAGWTST PTLGQLAMAV ALMMAFLIIE SRVPHPLMPL RMFALRNVAT ANVVGVLWAA AMFAWFFISA LYMQRVLHYS AMQVGLAFLP ANIIMAVFSL GLSAKLVMRF GIRAPLSIGL LMAALGLALF ARAPAGGGFL LDVLPGMVLL GLGAGVAFNP VLLAAMSDVA PDESGLASGV VNTSFMMGGA LGLAILASLA AARTESLAGA NADAVTALNG GYHLAFMLGA GAAVLASVLA AVFVRTRAHG PAQGDAPSPA SI
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