Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4543 |
Symbol | |
ID | 6285006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 871099 |
End bp | 874200 |
Gene Length | 3102 bp |
Protein Length | 1033 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619024 |
Product | acriflavin resistance protein |
Protein accession | YP_001893060 |
Protein GI | 187926715 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.266065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTT CCGCGTGGGC GATCCGCAAG CCGATTCCGC CGATCCTGCT GTTCATCCTG ATGACGGTAG CGGGGCTGGT GTCGTTCAAG ATGCTGTCGA TCCAGAACTT TCCGGACATC GACTTTCCCG CTGTGTCGAT CACGGCGAGC TTGCCGGGTG CCACGCCCAC GCAGATGGAG ACCGAGGTCA CGCGCAAGAT CGAGGACAGC GTTGCCAGTA TCGGTGCGAT CAAGCACATC ACGTCCACCG TCAACGACGG CAGCTCGACC ACGATGGTGG AGTTCGAGTT GGAAAAGGAT GTGCAGGAGG CGGTGAACGA TGTGCGCGAC GCCGTCAGCC GCATTCGCGC GCAGTTGCCT TCGGATGTGC AGGAGCCGGT CATCTCGCGC GTGACCTTTG CAGGCATGCC AGTGCTGACG TATGCAGTGG ATGCGCCCGA CATGGACGCT GAGGATCTTT CCTGGTTTGT CGATAACACC ATCAGCAAGC GCCTGCTCTC GGTGCATGGC GTGGCCAAGG TCACCCGCCA GGGCGGGGTA GACCGCGAGG TGCGCGTCCA ACTCGATCCG GTGCGCCTGC AGGCGTTGAA TGTCACGGCG GCCGACATCA GCGCACAGGT GCGCGGCGTG CAGCAGGAAG CGCCGGGCGG GCGCGGCAAT ATCGGCGGGC AGGAGCAGGC CGTGCGCACG CTGGGCACTG TGAAGAGCGC GCGCGAGCTG GCGCAGATGG ACATTCCGCT CTCCGACGGC CGGCGCATCC GTCTCTCCGA TGTGGCCGAC GTGCGCGACA CCGCCGCCGA GCCCCGCCAA ATGGCCTTGC TCGACGGCAA GCCGGTGGTG AGCTTTCAGG TGTTCCGATC GCGCGGCGCG AGCGAGATCT CGGTTGCGAA GGGGGTTCGC GAAGCGCTGG CCCGGCTGCG GACAGAGCGC CCGAACGTGC ACGTGACCGA GGTCTACAAC ATGGTCAAGC CAGTGTCGGA TGCCTATGCC GCGTCAATGC ACGCGCTGTA CGAAGGCGCG ATCCTGGCGG TGCTGGTGGT GTGGCTGTTC CTGAGGGACT GGCGGGCGAC ATTCGTGTCT GCGGTGGCGC TGCCGCTATC CATCATCCCG ACCTTTGCAG CCATGAACAT GCTGGGCTTC ACGCTCAACG GCATCACGCT GCTGGCGCTC ACGCTGGTGG TCGGGATCCT GGTCGACGAT GCCATCGTCG AAGTGGAAAA CATCGTGCGC CACCTGCGTA ACGGCAAACC GCCCTACGAG GCGGCGCTGG AGGCCGCGCA GGAAATCGGC CTCGCCGTGG TGGCCACGTC GCTCACGCTG GTGGCGGTCT TCCTGCCGAC GGCCTTCATG GGGGGCATCT CGGGCAAGTT CTTCAAGCAG TTTGGCTGGA CGGCGTCGCT GGCGGTGCTG GCCTCGTTGC TGGTCGCGCG CTTGCTGACG CCAATGATGG CAGCCTACCT GCTCAAGCCC CAGGACGAGC CGAACCGCGA CGGCTGGATC ATGGTGCGCT ACCTCCGCGC GGCGCGCTGG TGCCTGATCC ACCCGTGGAA GACGAGCGCC ATGGCGGCCG TCTTCTTCGC GGTATCGGTG GCCATCATCG GGTTGATTCC TGCGACGTTC CTTCCGCCCG AAGACTGGGC GCAGCTGCAG ATGACGGTGG AAAGCCCACC GGGCAGCACC ATCGCGCAAA CGCGTGACAA CGTCGAGCGC GTGCGTAAGA TCGTCATGCA GCACAAGGAC GTGCGCCGTG TCTACGCCGC CATCGGTTCG GGCGTGATGG CCGGCGTACC GGGCTCCAGC GGCGGTGAGG TACGCACCGG CACGCTCACC ATCTCGCTCA CGGACCGCCA CGAGCGGCGT ATCCGGCAGC AAGAGGTGCA GCGCCAGTTG CGCGAGATGC TGGAGGGCGT GCCCGGTGTG CGCATTTCGT TCGGCGCTGT CGGTTCGGGC GAGCAATTGC AGGTGGTGCT CGCCGGCGAT GATCCGGCAA CGTTGCAGCA GGCTTCCCGC GACGTGATGC GTGACCTGCG TACGGTGCCG GGGCTGGGTG CGATCACCTC GTCGGCCAGT CTGCTTCGAC CAGAGATCGT GATCCGCCCG GATTTTGCGC GGGCTGCCCA GCAAGGCGTG ACGGCTGCCG CCATCGGGCA GGCGGTGCGC GTGGCCACCG CCGGCGACTA CGACGTCAAC CTGCCCAAGC TGAACCTGCC AGAGCGGCAG GTGTACATCC GCGTCGAGCT GGACCCGAAG GCGCGCCACC AGATCGATAC GATCCGCCAG TTGCGGGTGC CCGGCCGCAA TGGCGCAGTG CCGCTCGAAA ACATCGCCGA TATCACGCTC GGCAGCGGCC CAGCCCAGAT CGATCGCTAT GACCGCAGCC GCAACGTCAC CATCAGCGTG GGGCTGGAGG GACGCGCGCT CGGCGACACC AACATGGCGG TGGAGGCCCT GCCGGCCATC AAGAACCTGC CGCCGGGTGT GCGCCGCATT GCCTCCGGGG ATGTCGAGGG CATGCAGGAG CTGTTCAGCA GTTTCTTCCT CGCCATGCTC GCAGGTGTGC TGTGCGTGTA CGCGGTGCTG GTGTTGCTGT TCCATGACTT CACGCAGCCG GTGACGATTC TGGCGGCCTT ACCGCTCTCG GTGGGTGGGG CCTTTGGCCT GCTGGCGCTG TTCGGCTTCA GTCTGTCGCT GCCGGCGCTG ATCGGCCTGC TCATGCTGAT GGGCATCGTC ACCAAGAACT CGATCCTGCT GGTTGAATAC GCCATCGTGG CGCGGCGTGA TCTGGGCATG TCGCGCACGG AGGCCATCAT CGATGCGTGC CACAAGCGTG CGCGCCCGAT CGTCATGACG ACTGTGGCGA TGACGGCCGG CATGGTGCCG ATGGCACTCG GCCTGGAGGG CGACGCGGGC TTCCGTGCGC CCATGGCCGT GGCCGTGATC GGCGGGCTGC TGACGTCGAC GTTGCTGAGC CTGCTGGTGG TGCCGGTGGT ATTCGAGAAG GTGGACGACC TCAAGGAATG GACCCTGCGC AAGGTACGCG GCGCCCGCCG CCACGAGGTC AAGGTGCAAC CTGAAGCAGA GCAGGGCGCG GGACAGGCGT AG
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Protein sequence | MNFSAWAIRK PIPPILLFIL MTVAGLVSFK MLSIQNFPDI DFPAVSITAS LPGATPTQME TEVTRKIEDS VASIGAIKHI TSTVNDGSST TMVEFELEKD VQEAVNDVRD AVSRIRAQLP SDVQEPVISR VTFAGMPVLT YAVDAPDMDA EDLSWFVDNT ISKRLLSVHG VAKVTRQGGV DREVRVQLDP VRLQALNVTA ADISAQVRGV QQEAPGGRGN IGGQEQAVRT LGTVKSAREL AQMDIPLSDG RRIRLSDVAD VRDTAAEPRQ MALLDGKPVV SFQVFRSRGA SEISVAKGVR EALARLRTER PNVHVTEVYN MVKPVSDAYA ASMHALYEGA ILAVLVVWLF LRDWRATFVS AVALPLSIIP TFAAMNMLGF TLNGITLLAL TLVVGILVDD AIVEVENIVR HLRNGKPPYE AALEAAQEIG LAVVATSLTL VAVFLPTAFM GGISGKFFKQ FGWTASLAVL ASLLVARLLT PMMAAYLLKP QDEPNRDGWI MVRYLRAARW CLIHPWKTSA MAAVFFAVSV AIIGLIPATF LPPEDWAQLQ MTVESPPGST IAQTRDNVER VRKIVMQHKD VRRVYAAIGS GVMAGVPGSS GGEVRTGTLT ISLTDRHERR IRQQEVQRQL REMLEGVPGV RISFGAVGSG EQLQVVLAGD DPATLQQASR DVMRDLRTVP GLGAITSSAS LLRPEIVIRP DFARAAQQGV TAAAIGQAVR VATAGDYDVN LPKLNLPERQ VYIRVELDPK ARHQIDTIRQ LRVPGRNGAV PLENIADITL GSGPAQIDRY DRSRNVTISV GLEGRALGDT NMAVEALPAI KNLPPGVRRI ASGDVEGMQE LFSSFFLAML AGVLCVYAVL VLLFHDFTQP VTILAALPLS VGGAFGLLAL FGFSLSLPAL IGLLMLMGIV TKNSILLVEY AIVARRDLGM SRTEAIIDAC HKRARPIVMT TVAMTAGMVP MALGLEGDAG FRAPMAVAVI GGLLTSTLLS LLVVPVVFEK VDDLKEWTLR KVRGARRHEV KVQPEAEQGA GQA
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