| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4525 |
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| Symbol | |
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| ID | 6285382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 848967 |
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| End bp | 850793 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642619006 |
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| Product | ABC transporter related |
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| Protein accession | YP_001893042 |
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| Protein GI | 187926697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0349155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.794169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAT TGACGAAATC CTCCGATCGG CCAACGCAGC GGGGCTGGCT CACGCGCAAC
CGCCTCCTGA CTGCGCTGTT TGTGATCGTG CTGGCGCTCT TGCCCGTGCT GCCGACGCCC
GAGTTCTGGA TCACGCTGCT CAATTACATC GGGCTGTACA GCCTCGTCGC GTTGGGCCTG
GTCCTGCTGA CCGGCGTGGG CGGACTGACG TCGTTCGGGC AGGCGGCGTT CGTGGGTCTG
GGGGCGTACA GCACGGCGTA TCTCACGACG CAGTACGGCG TGTCACCGTG GATCGGCCTG
CTGGCGGGGC TGGTCATTAC GGTGGTGTCT GCCTACCTCA TCGGCCTCAT CACGATGCGC
ATGTCAGGCC ATTACCTTCC GCTGGCGACG ATTGCCTGGG GCCTGTCGCT GTTCTTCCTG
TTCGGCAACC TCGAGTTTCT GGGCAAGTAC GACGGCTTGA ACGGCATCCC TGTATTGAAC
CTGCTCGGCA ATCCGCTGCA GACCGGGCGT GAGATGTTCT ATCTGATCTG GGCGGTGGTG
GTGGTGGCAG TGCTGGCGGT GCAGAACCTG TTGAACTCCC GGCCGGGGCG CGCCATCCGT
GCGCTCAAGG GCGGTGGCAC CATGGCCGAA GCGATGGGCG TGAACACCGC GTGGATGAAG
GTGGTGATCT TTGTGTGCGC GGCGGTGCTG GCATGCCTGT CGGGCTTTCT CTATGCGCAC
CTGCAGCGCG CGGTCAACCC GACGCCGTTT GGCCTGAACT ACGGCATCGA ATACCTGTTC
ATGGCGGTGG TCGGCGGGGT GGGGCACGTA TGGGGCGCGG TGCTTGGCGC CGGTGTGCTG
ACCATCCTGA AAGACAGCCT GCAGAGCATC CTGCCGAAGC TGCTGGGCAC CAACGGCAAC
TTCGAGATCA TCGTGTTCGG CGTGCTCCTG GTGCTGCTGC TGCAGTACGC GCGCGACGGC
GTATGGCCGT TCATCCGCAA GCTGCTTCCT TCGGAGCCGA CGGCGCGTGC GCCGGACGAA
GCGCCGGCGC TCATGCAGCG GGACAAGCCG CAGGCCGGTG AGCTGATTCT CGACGTGCGC
GCAGCGCGCA AGGAGTTCGG CGGTCTGGTG GCGGTCAACG ATGTGAGCTT CCAGGTGCGG
GCCGGCGAAA TCATCGGCCT GATCGGTCCC AACGGCGCCG GAAAGTCGAC CACATTCAAC
CTGGTGACCG GTGTGCTGCC CGTCACGCGC GGCGAGGTGC TGTATCGCGG TGAAACCATC
AGCGGCAAGC CGTCGCGGGA GATCGTCAAG CGCGGCATCG GCCGCACGTT CCAGCATGTC
CAGTTGCTGT CGGGCATGAG CGTGCTCGAG AACGTCGCAC TCGGCGCGCA CCTGCGTGGC
GACTTCGCGG CGCAGGGCGG CGTGCTCGCC AGCGTCGTTC GGATGAATCA GGCCGAAGAG
CAGAAGCTGC TGTTCGAGGC GCGCCGACAA CTCGAGCGCG TGGGACTGGC TGATTGCATG
TATCAGGAGG CAGGCAGCCT GGCGCTTGGC CAGCAACGCA TTCTGGAAAT TGCGCGCGCA
CTGTGCTGCG ATCCGGCACT GCTGTTGCTT GACGAGCCCG CCGCAGGCCT GCGCTACCAG
GAGAAGCAGG CACTGGCCGC ACTGCTCACA AAGCTCAAGG CCGAAGGCAT GAGCGTGCTG
CTGGTCGAGC ACGACATGGA TTTCGTGATG AACCTCACCG ACCGGCTTGT GGTGATGGAG
TTCGGCACCA AGATCGCGGA GGGGCTCCCG CAGGACGTGC AGCAGAACCC GGCGGTGCTG
GAAGCCTATC TCGGCGGCGT GGAATAA
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| Protein sequence | MTTLTKSSDR PTQRGWLTRN RLLTALFVIV LALLPVLPTP EFWITLLNYI GLYSLVALGL
VLLTGVGGLT SFGQAAFVGL GAYSTAYLTT QYGVSPWIGL LAGLVITVVS AYLIGLITMR
MSGHYLPLAT IAWGLSLFFL FGNLEFLGKY DGLNGIPVLN LLGNPLQTGR EMFYLIWAVV
VVAVLAVQNL LNSRPGRAIR ALKGGGTMAE AMGVNTAWMK VVIFVCAAVL ACLSGFLYAH
LQRAVNPTPF GLNYGIEYLF MAVVGGVGHV WGAVLGAGVL TILKDSLQSI LPKLLGTNGN
FEIIVFGVLL VLLLQYARDG VWPFIRKLLP SEPTARAPDE APALMQRDKP QAGELILDVR
AARKEFGGLV AVNDVSFQVR AGEIIGLIGP NGAGKSTTFN LVTGVLPVTR GEVLYRGETI
SGKPSREIVK RGIGRTFQHV QLLSGMSVLE NVALGAHLRG DFAAQGGVLA SVVRMNQAEE
QKLLFEARRQ LERVGLADCM YQEAGSLALG QQRILEIARA LCCDPALLLL DEPAAGLRYQ
EKQALAALLT KLKAEGMSVL LVEHDMDFVM NLTDRLVVME FGTKIAEGLP QDVQQNPAVL
EAYLGGVE
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