Gene Rpic_4524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4524 
Symbol 
ID6285313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp848212 
End bp848955 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID642619005 
ProductABC transporter related 
Protein accessionYP_001893041 
Protein GI187926696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.180068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.792034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTCA TTCTCGAAGT GAAGGACTTG CACGTCCGCT ACGGCAAGGT GGAAGCGCTG 
CATGGCGCCC ACCTCAAGGT GGGCTCGGGG CAGATCGTCA CCGTGATCGG CCCGAATGGC
GCGGGCAAGT CGACGATGTT GGGCGCCATC ATGGGCGCGT TGCCGATCAC GGGGTCAGCC
AGTGGCGTCG TCTCGTACCT GGGTCACAAC CTGACCGGGC TGCCGGTGGA AAAGCGCGTC
GCACGTGGCA TGTGCCTGGT CCCCGAAAAG CGCGAGCTGT TCGCCACCAT GAGCGTGGAA
GACAATCTCG TGCTGGGCGC GTACCGGCGC AAGCGCGCGG GGGAGCGCCA TTACCTGGAC
CAGATGGACC TCGTCTACGA TCTCTTCCCG CGACTCAAGG AGCGACGCGT GCAGGAAGCC
GGCACGCTCT CCGGCGGCGA GCGCCAGATG CTTGCGGTCG GTCGCGCACT GATGGCCAAG
CCGCAGTTGC TGATGCTCGA TGAGCCCAGC CTCGGTCTCG CACCGCTAAT CGTGAAAGAG
ATCTTCCACA TCATCAGTGA CCTGCGCAAA ACCGGCGTGG CAACGCTGCT GATCGAACAG
AACGCACGCT CGGCACTGCA AGTGGCCGAT TACGGCTACG TGCTGGAGAC TGGCGACATG
ATGCTCGAGG GGCCGGCGCA GGAACTGGCA GGCAATCCGC GCGTGATCGA AACCTATCTG
GGGCTGGCGA AGAAAGCGGC TTGA
 
Protein sequence
MSVILEVKDL HVRYGKVEAL HGAHLKVGSG QIVTVIGPNG AGKSTMLGAI MGALPITGSA 
SGVVSYLGHN LTGLPVEKRV ARGMCLVPEK RELFATMSVE DNLVLGAYRR KRAGERHYLD
QMDLVYDLFP RLKERRVQEA GTLSGGERQM LAVGRALMAK PQLLMLDEPS LGLAPLIVKE
IFHIISDLRK TGVATLLIEQ NARSALQVAD YGYVLETGDM MLEGPAQELA GNPRVIETYL
GLAKKAA