| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4459 |
|---|
| Symbol | |
|---|
| ID | 6285336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 774377 |
|---|
| End bp | 775384 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642618938 |
|---|
| Product | NMT1/THI5 like domain protein |
|---|
| Protein accession | YP_001892979 |
|---|
| Protein GI | 187926634 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0725563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.370588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AGACCGCGGG CATCTCGCGC CGCAAGATAT TGCACGCAGC GGCCGCCACG
GCGCTGGCTG CACCGGCATT GATCCTGGGC CGCAAGGCCT ACTCGCAACA GCGCAAGCTG
ACGTTTGCTT GGAACCAGAA CGCGTTTTGC CTGACGCCCA TCGTGGTGGC GCAGGAACGC
GGCTTCTTCG AAAAGAACGG ACTGCACGTC GATCTGATCA ACTACAGCGG CTCGACCGAT
CAACTGCTCG AATCGATCGC CACCGGCAAG GCAGATGCCG CAGTGGGCAT GATTCACCGC
TGGCTCAAGC CGCTGGAAGC GGGCTTCGAC GTGAAGATCA TCGGCAGCTC GCATGGCGGC
TGTGTGCGGC TTGTGGGTTC CAAGGCGGCA GGCGTCACCA GCCTGGCGGC GCTCAAGGGA
AAAACCGTAG GCGTGAGCGA TCTTGCTGCC CCGGGCAAGC ACTTCTTCAC CATCCTGCTG
GCCAAGAACG GCATTGACCC GGACAAGGAC GTCACGTGGC GCCAGTACCC GGCCGACCTG
CTGGGCGTGG CGGTGGACAA AGGCGAGATC CAGGCGATTG CCGACGGCGA CCCCAACCTT
TTCCTGCTGG AGAAGCGCAC GAACGGCGCC TACGTGGAGC TGGCCACGAA CCTCTCCGGT
GAATACGCAC GCAAGGTCTG CTGCGTGATC GGCGCACGCG GCGAGCTGGT CCGCAATGAC
CGCCCGACGG CATCCGCACT GGCGCGTTCG ATTGTGCAAG CCACGGATTT CGTCAACGAA
AACCCGAATG AGGCGGCCAA GGTGTTTGCC AAGTATTCGC CCAAGGTGGC GCTGGACGAC
TTGCGCAAGC TCTACGCCAC GCTCACGTAC ACGCATCACC CGACCGGCGT CGACCTGCGC
GACGAGATCG CCTTCTACGC GGAAGACTTC CGCCGCATCG GCGTCATCAA GAAGACCACC
GATCCGCAGC GCCTGGCGCA GCACGTGTAC GTGAATGTGC TGGCCTGA
|
|---|
| Protein sequence | MSEETAGISR RKILHAAAAT ALAAPALILG RKAYSQQRKL TFAWNQNAFC LTPIVVAQER
GFFEKNGLHV DLINYSGSTD QLLESIATGK ADAAVGMIHR WLKPLEAGFD VKIIGSSHGG
CVRLVGSKAA GVTSLAALKG KTVGVSDLAA PGKHFFTILL AKNGIDPDKD VTWRQYPADL
LGVAVDKGEI QAIADGDPNL FLLEKRTNGA YVELATNLSG EYARKVCCVI GARGELVRND
RPTASALARS IVQATDFVNE NPNEAAKVFA KYSPKVALDD LRKLYATLTY THHPTGVDLR
DEIAFYAEDF RRIGVIKKTT DPQRLAQHVY VNVLA
|
|---|
| |