Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4455 |
Symbol | |
ID | 6285428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 770365 |
End bp | 771306 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618934 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_001892975 |
Protein GI | 187926630 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.568773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.625935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAC ATCGACGACG TTTTCTGCAA TCCACGCTGG CACTCGCTGC CGCGCCTGCC TTGTCCATCG CGCAACCCCG CCTCGTGCTC AAGGCCGGCG ACCAGAAGGG CGGACTGCGC GCGCTGCTCG AAGCCGCCGA CGCGCTCAAA GGCGTGCCGT ACGACATCCA ATGGACCGAA TTTCCGGCGG CCGCACCGCT GGCCGAAGCG CTCAATGCAG GCGCCGTCGA CTTGGGCCCC ATTGGGGATG CGCCAGCCAT CTTTGCCTTG GCGGCGGGTA CGCGCATCAA GCTGATCGGC GCCAACCGAT CCGACCCATA CGGCACGGCG GTGCTGGTGC GGCCGGATTC TCCGCTGAAG ACCGCCGCGG ATCTGAAAGG CAAGTCGATC GGCACAAACC GCGGGTCGAT CGGGCACTTC GTGGCGCTCA AGGCGTTGGA ATCTGCAGGG CTGGGCCCGG ACGACGCCAA CTTCCGTTTT CTGCCGCCTG CGGATGCCAA GCTTGCGCTG GTCAACGGTT CGATCGATGC GTGGTCAACG TGGGAGCCTT ACACCGCGAT GGCCGAAACG GCCAAGCATG CGCGCGTGCT GGTCAACGGA CGCGGGTTGT GGTCGGGCCT CAGCTACCTG GCGGCGACCG ACGCGGCCCT GGCGGCCAAG CGCGACGCGC TGCGCGATTT CCTGCAGCGC GTGGTACGCG CGCAGGTGTG GTCGTATCAG CATGTCGATA GCTTTTCAGC CACGCTGGCC CGCATCATCG GCATTGCGCC GGAGGCCGCG CGGCTGCAGT TTGCGCGGCG GCAGACTGTG TGGCGCGCCA TCGATCCGCA GCTCATTGCG GAGCAGCAGC GCACGGCCGA TTTCTACGTG AAGGTGGGCC TGCTCAAACA GCGGCTGGAG GTGGCTACCA CGTTTGACAC GGGCTTTCCG CTAATCGCCT AG
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Protein sequence | MPQHRRRFLQ STLALAAAPA LSIAQPRLVL KAGDQKGGLR ALLEAADALK GVPYDIQWTE FPAAAPLAEA LNAGAVDLGP IGDAPAIFAL AAGTRIKLIG ANRSDPYGTA VLVRPDSPLK TAADLKGKSI GTNRGSIGHF VALKALESAG LGPDDANFRF LPPADAKLAL VNGSIDAWST WEPYTAMAET AKHARVLVNG RGLWSGLSYL AATDAALAAK RDALRDFLQR VVRAQVWSYQ HVDSFSATLA RIIGIAPEAA RLQFARRQTV WRAIDPQLIA EQQRTADFYV KVGLLKQRLE VATTFDTGFP LIA
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