Gene Rpic_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4447 
Symbol 
ID6285885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp760803 
End bp761648 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID642618926 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001892967 
Protein GI187926622 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0155912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTG AATTGAACAT TCAAAACGAC CCGCTCGACG GCGTGACCAC ACGCTGCCAC 
CGCGTGCTGC TCACGGGCGC CGGCGGCAAT CTCGGCAAGG TGCTGCGCGA GCGGTTGCCC
AAGTACGCCG ATTTTTTGCG CCTGTCTGAT ATATCAAATC TTGGTGAAGC GCGCACCGGC
GAAGAGATCG TGCCGTGCGA CCTTGCCGAC GCGAAAGCCG TCGATGCGCT CGTCGCTGGC
ACGGATGCGA TCGTGCATCT GGGCGGCGTA TCGGTCGAGC GGCCGTTTGA AGAAATCCTG
CCGGCCAATA TCGCAGGCAC CTACAACCTG TACGAAGCGG CGCGCCGTCA TGGCGTGCGG
CGCATCGTGT TCGCCAGCTC GAACCACACC ATCGGCTTCT ACAAGCAGGG CGAGGTGATC
GACAGCGCCG TGCCCACCAA GCCCGATGGC TACTACGGGC TGAGCAAGGT GTTTGGCGAA
CAGCTCGCCA GCTTCTATTT CGATCGCTAT GGCATCGAGA CGGTTGCCAT CCGCATCGGC
TCTTCGTTTG CCGAAGCGAA GGACCGCCGC ATGCTCGTCA CCTGGCTCGG GTACGACGAC
CTCGAACAGC TCATCCGCCG CGCGCTGTTC GTGCCGAACG TGGGCTTTAC CGTGGTCTAC
GGCATGTCGA ACAACCGCGA CCGCTGGTGG GACAACCGCC ACGCCGCGCA CCTCGGCTAC
ACACCTACGC AGACGAGCGA GATCTTCCGC GCGCAGGTCG AAGCGCAGCC GCCGCTGCCT
GCCGATGATC CGGCTGCGCA GTATCAAGGC GGTGCATTTG TCAAAGCCGG CCCGTTCGGA
GACTGA
 
Protein sequence
MTTELNIQND PLDGVTTRCH RVLLTGAGGN LGKVLRERLP KYADFLRLSD ISNLGEARTG 
EEIVPCDLAD AKAVDALVAG TDAIVHLGGV SVERPFEEIL PANIAGTYNL YEAARRHGVR
RIVFASSNHT IGFYKQGEVI DSAVPTKPDG YYGLSKVFGE QLASFYFDRY GIETVAIRIG
SSFAEAKDRR MLVTWLGYDD LEQLIRRALF VPNVGFTVVY GMSNNRDRWW DNRHAAHLGY
TPTQTSEIFR AQVEAQPPLP ADDPAAQYQG GAFVKAGPFG D