| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4285 |
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| Symbol | |
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| ID | 6285799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 584912 |
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| End bp | 586282 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618768 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001892809 |
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| Protein GI | 187926464 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATATC GGGGTGCGTT TCATTCAAGG GCAAGGGCCG TGCTATGCGC GGTGGCCTGC
CTGCCATTTG CCGCTGCCTG GGCAGCCACG CCGGCATCGG CGCCGGCTGC GGCCAGCATG
CCGGTCCCGA CCATGCCGCC GATCCAGCCA TCCGTGCCGG GCGTGACGGG TGCTGGCTTC
AACCTGGTCG AACTGTTGCA GGAGCTGAAA GGCAACAACC CGCAATTGAT CCAGGGGCGC
CACACCTACC TGTCAGCCAA GTCGATACCG CCGCAGCTTG CGTCGCCCAA CAACCCGCAG
CTCGGCTATA TCTGGAACAG CATCCCGAAG GGATTCCCGC TGGCGGTGAA CCGCGCGGGC
GGCAGCCAGT ACAACCTGAC GCAGCAGATT CCGTTTCCGG GCAAGAAAGC GCTGGCGGCC
GAGATTGCCG ATCGCCAGGC TGAGTCCCTG AACGCGCAAA ACGACGCGCT GTACCTGCAG
CTCTATGCGC AGCTTTCCAC CACGTACTAC CAGGCGATTG CGCTGCAAAA GCAGATCGAC
GTGCAAAAGC TGACCATCAC GCGCCTGGAG CAGGTCAAGC AGATCACGCG TGTGCGCTAC
GCCAACAACG CCGCCGCCTA CGCAGACTTC CTCAACGCGC AGGTCATGCA GAGCAGCGCG
CAGAACGACC TGTTTGCCGC TCAGCGCCAG TACGACAGCA CGCTGCAGAC GCTCAACACG
CTCATCGGGA AAGATCCGAG CTTCCCGCTC GTGCTGCGCG CAGACGACGA GGCTGTCCAC
CTGCCGGAAG AACCGCTGCC CGAACTGGAA AACCAGGCGC TGCGCGAGCA CCCGTCGATC
AAGGCATCGG CCGAGCTGAT GGACGCGGCA CGCAAGAGCG TGACGCTGGC GCGCAAGGCC
TACCTGCCCG ACTTCCAGGT CATTGCCACC GTCACGACGG ACAACCCGCC GTATGGCGTG
CGCCCGAACA GCTACCAGAT CGAGCTGGAC GTGATCATCC CGTTCTGGTT CCTGACCAAA
GAGAAGTACG GCGTGAACCA GGCGGTGGAA AGCCAGATTG CCACCGAGGC GAACGACGTG
TCGGTGCGCC AGCAGACGTT ACTGGCCGTC GATACCGCCT ACAACACGCT GCGCCAGACG
CTTGCGCAGC TCGACTTCAA CAAGCAGCGG CAACTGCCGC AGGCGCTGGC GGCCTATCGC
GTCACGATGA CCAACTACGC CAGCAACAAC GCCGATTTCA ACGACCTGCT TACCGCCCAG
GGCGCGCTCA AAAACGCCGA ACTGGCGGTC GCGCAGGCGC AGGCCACGGC CTTGCAGGCC
TATCACGCGC TGCTCGCGGC CACCGGCCGC TCGCCGGTTC AAGCTCAATA A
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| Protein sequence | MKYRGAFHSR ARAVLCAVAC LPFAAAWAAT PASAPAAASM PVPTMPPIQP SVPGVTGAGF
NLVELLQELK GNNPQLIQGR HTYLSAKSIP PQLASPNNPQ LGYIWNSIPK GFPLAVNRAG
GSQYNLTQQI PFPGKKALAA EIADRQAESL NAQNDALYLQ LYAQLSTTYY QAIALQKQID
VQKLTITRLE QVKQITRVRY ANNAAAYADF LNAQVMQSSA QNDLFAAQRQ YDSTLQTLNT
LIGKDPSFPL VLRADDEAVH LPEEPLPELE NQALREHPSI KASAELMDAA RKSVTLARKA
YLPDFQVIAT VTTDNPPYGV RPNSYQIELD VIIPFWFLTK EKYGVNQAVE SQIATEANDV
SVRQQTLLAV DTAYNTLRQT LAQLDFNKQR QLPQALAAYR VTMTNYASNN ADFNDLLTAQ
GALKNAELAV AQAQATALQA YHALLAATGR SPVQAQ
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