Gene Rpic_4237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4237 
Symbol 
ID6285697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp524024 
End bp525565 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content62% 
IMG OID642618720 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001892761 
Protein GI187926416 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC TCACGCTTCG TCAGAAGCTG TGGCTGCCAC TTGTCCTGAG TTGGCTTTGT 
CTGTTGTTGA TCACATTGTG GAGCACTTGG GAGACCCGCA CCCTGCGCCT GGAAGAACGC
CAGCGCGACT TGCAGAACAT CAGTGAATCC GTATTCAGCA TCATCAAAGA CTACGGACAG
ATGGCGCAAG ACGGTAAGCT CGCCGCCGAC GAGGCCCGCG CCCAGGCCCT CGCGCGCATC
AAGATGATCC GCTACGGCAA GGATGGCTAC TTCAGCATCA ACCAGACCAA CTCGGTGATG
GTGATGCATC CGATCAAAGC CGAAATGAAC GGCAAGGACA TGTCGGGTTT TACCGACCCG
GCAGGGAATC ATCTGTTCGA GGAAATCTCT CGCGTGGGCA AGAGCGGCGG CGGCTTTGTC
GATTACCTAT GGCCCAAGCC CGGCGCGGAA GCGCCGCAGC CGAAGAAGAG CTACGTGCTG
TATTACCAGC CTTGGGACTG GTGCCTCGTC ACGGGCACGT ATATGGACGA CATCGAGACC
GCATTCCACG CGTCGCTAAT CAAGGCGCTG GGGCTGCTGT TTGGTGTCGG CTTGCTGATG
ACTGTGGTGG TCGTGGCCGT TACGCGCAGC CTGCAGCGCC AGTTGGGTGG CGAGCCCGCT
TATGCTGCCC GCATTGCCGG CCGCATCGCC GCGGGTGATC TGGCTGTGCC GGTTGAAACC
CGCTCGGGGG ATCGCGACAG CATGCTCTAC GCCATGGCGC AGATGCAGCG TGAGCTGACG
GGCACGATCG GCAACATCAA GAGCTCGGCG GATTCCATTG CCAGCGCCAC CAAGCAGATC
GCTGCCGGCA ATGCCGACCT GTCGCAGCGT ACGGAGCAGC AGGCCTCGTC GCTGGAAGAA
ACGGCGTCGA GCATGGAGGA ACTGACGAGC ATCGTGAAGC AGAACGCCGA CAATGCGCGT
CAGGCAAGCA CACTGGCCGT CAATGCGTCG GATATTGCGG TCAAGGGCGG AGAGGTGGTC
GGGCGCGTGG TCGAGACAAT GTCCGGCATC AACGAAAGCA GCAAGAAGAT TGCCGACATC
ATCGGGGTGA TCGAGGGCAT CGCTTTCCAA ACCAACATCC TGGCGCTGAA CGCTGCCGTG
GAGGCCGCCC GCGCGGGCGA GCAGGGCCGA GGCTTTGCCG TGGTGGCGGG CGAAGTGCGC
AGCCTGGCGC AGCGCTCGGC GAGCGCTGCC AAGGAAATCA AGGACCTGAT CGGCGATTCG
GTGGGCCGGG TGCAGAACGG CTCGGCGCTG GTGGAAGAGG CTGGCGTGGT GATCCAGGAC
GTGGTGACTG CCGTGAAGCG CGTAACGGAC ATCATGGGCG AGATTTCTGC GGCGTCCGAC
GAGCAGAGTT CCGGCATCGA GCAGGTCAAC CAGGCTGTGA ACCAGATGGA CGAAGTGACG
CAGCAGAACG CTGCGCTCGT GGAGCAGGCG GCGGCCGCTG CGCTGTCGCT GGAAGAGCAG
GCGCAATTGC TGCGTACGGC TGTGGGGCGC TTCCAGGTAT AA
 
Protein sequence
MNRLTLRQKL WLPLVLSWLC LLLITLWSTW ETRTLRLEER QRDLQNISES VFSIIKDYGQ 
MAQDGKLAAD EARAQALARI KMIRYGKDGY FSINQTNSVM VMHPIKAEMN GKDMSGFTDP
AGNHLFEEIS RVGKSGGGFV DYLWPKPGAE APQPKKSYVL YYQPWDWCLV TGTYMDDIET
AFHASLIKAL GLLFGVGLLM TVVVVAVTRS LQRQLGGEPA YAARIAGRIA AGDLAVPVET
RSGDRDSMLY AMAQMQRELT GTIGNIKSSA DSIASATKQI AAGNADLSQR TEQQASSLEE
TASSMEELTS IVKQNADNAR QASTLAVNAS DIAVKGGEVV GRVVETMSGI NESSKKIADI
IGVIEGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSASAA KEIKDLIGDS
VGRVQNGSAL VEEAGVVIQD VVTAVKRVTD IMGEISAASD EQSSGIEQVN QAVNQMDEVT
QQNAALVEQA AAAALSLEEQ AQLLRTAVGR FQV