Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4227 |
Symbol | |
ID | 6285679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 513138 |
End bp | 514082 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642618710 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001892751 |
Protein GI | 187926406 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCGCT TGCAGGCCAT GCAGGTTTTC ACGCGCGTCG TGGAAGCCAG CAGTTTCACC AAGGCTGCCG ACAGCCTTCA GTTACCCCGC GCCACGGTGA CGAACCTGGT GCAAAGCCTT GAGGCACACC TTGGCGTGCG CCTGCTGCAC CGGACCACAC GCCGTGTGAA TGTCACCGCC GATGGCGCTG CGTATTACGA GCGCTGCGTA CGCTTGCTCG GCGATCTTGA AGAGACCGAG GCTGCGTTCT CGCAAAGCTC GTCGGGCGCA CGCGGCACCT TGCGCATCGA CGTGCCTGCG TCGATTGGCA AACGGTTGCT TGTGCCGCGC ATTCGCGATT TTCACGAGGC GTACCCCGAT CTTCAGTTGG AGATCGGCAT GAGCGATCGC ACCGTCGACC TCGTGCAGGA GGGCGTGGAT TGCGCCGTGC GCGGTGGCGA GTTGCAGGAC TCCAGCCTTG TCGCGCGCCG CATCGGCCAG CTGTCGATGG TCAATTGCGC GTCGCCCGAA TATCTGGCCC GCTGCGGTAC GCCCAAGACG TTGGAAGACC TGCAGGACCA CACGGCGGTG AATTACTTCT CTGCGCGCAA CGGCCGCCGC ATGGATTGGG ATTTCGTAAT CGACGGGCAG AAGCAGATTC ACAAGGTGCG CAGCATGGTG TCCGTCAACG ATGCCGAATC GGCGGTGGCG TGTGGCCTGC ATGGCCTGGG GCTGCTACAG ACTTCACGCT TCCTGGTGTA TGAGCACCTG ATGTCGGGCG CGCTGGTGGA AGTGCTGCCG GATCATATTT CCGAAGCGGT GCCCGTATCG GTGGTGTATC CGCACAACCG GCATCTGTCG CCCAAGGTGC GGGTGTTTGT GGACTGGGTT GCGACGCTGT TTGCCGACCA CCCGTGCCTG CAGCTCAAGG AAAATCCGCG ACTGCACATT GTTAGCGCCG CCTGA
|
Protein sequence | MDRLQAMQVF TRVVEASSFT KAADSLQLPR ATVTNLVQSL EAHLGVRLLH RTTRRVNVTA DGAAYYERCV RLLGDLEETE AAFSQSSSGA RGTLRIDVPA SIGKRLLVPR IRDFHEAYPD LQLEIGMSDR TVDLVQEGVD CAVRGGELQD SSLVARRIGQ LSMVNCASPE YLARCGTPKT LEDLQDHTAV NYFSARNGRR MDWDFVIDGQ KQIHKVRSMV SVNDAESAVA CGLHGLGLLQ TSRFLVYEHL MSGALVEVLP DHISEAVPVS VVYPHNRHLS PKVRVFVDWV ATLFADHPCL QLKENPRLHI VSAA
|
| |