Gene Rpic_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4185 
Symbol 
ID6285614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp463593 
End bp464324 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID642618670 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001892711 
Protein GI187926366 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.469867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCA CCAAGATCCT GGTCGTCGAT GACGACGTCG AACTGCGCGA CCTCCTGCGC 
GAATACCTGA CCCAGCAGGG CTTTGCCGTT TCCGTGCTGC ACGACGGCGA CGGGCTGGCT
GCCCGGCTCG AACGCGAGCG CCCCGCGCTC GTCGTGCTCG ATCTGATGAT GCCCAAGGTG
GATGGCCTGT CGGCCCTGCG TGACCTGCGC GCCCGCAACG ACGACGTGCC CGTCATCCTG
CTCACCGCCC GCAGTGACGA GATCGACCGC ATCATCGGCC TGGAGATCGG CGCCGACGAC
TATCTCGGCA AGCCGTTCTC GCCGCGCGAG CTGCTGGCCC GTATCAACGC CGTGCTGCGC
CGCCGCCTGA CCGTGCCGGC CTCGGCCCCG GAAGACCGCG ACAGCTTCAG CTTCGGCCCG
TTCAAGCTCA ACTTCCGCAT GCGTACGCTG TTTCGCGGCG ACAGCGCACT CTCCATCAGC
GATACCGAAT TCGCGCTGCT CAAGCTGCTG ATCGGACATG CGATGCAGGT GCTCACGCGC
GAGCACATCG TCGAGCTGAT GTACGGGCCC GGCAGCGGCG TGTCCGACCG GGGCATCGAC
GTGCAGATCT GGCGCCTGCG CCGCGTGCTG GAAGAAGACG CCCAGCGTCC GCGCTACATC
CAGACCGTGC GCGGCCGCGG CTACACCTTC GTGCCGGACG AGCGGGAAGA GGTCAATGAA
GTTCAGGGCT AG
 
Protein sequence
MSGTKILVVD DDVELRDLLR EYLTQQGFAV SVLHDGDGLA ARLERERPAL VVLDLMMPKV 
DGLSALRDLR ARNDDVPVIL LTARSDEIDR IIGLEIGADD YLGKPFSPRE LLARINAVLR
RRLTVPASAP EDRDSFSFGP FKLNFRMRTL FRGDSALSIS DTEFALLKLL IGHAMQVLTR
EHIVELMYGP GSGVSDRGID VQIWRLRRVL EEDAQRPRYI QTVRGRGYTF VPDEREEVNE
VQG