| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4122 |
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| Symbol | |
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| ID | 6285519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 391904 |
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| End bp | 392953 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642618609 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001892650 |
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| Protein GI | 187926305 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0631102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTGT CCAGTTTCAT CAAGAAGCAG TTCATCGACA TCCTGCAATG GACGGAGAGC
GAAGACGGCG TGCTCGCCTG GCGCTATCCG ATGCAGGACA TGGAAATCCA GAACGGCGGC
ACCCTGGTCG TGCGCGACTC GCAGATGGCG ATGTTCGTCA ACGAAGGCCA GATCGCCGAC
GTATTTGGCG CCGGCACCTT CAAGCTGACC ACGCAGACGC TGCCCGTTCT CACGTACCTG
AAGAACTGGG ACAAGCTGTT CGAGTCCCCC TTCAAGTCCG ACGTCTACTA CTTCAGCACG
CGCCAGCAAC TGGGCCGCCG CTGGGGTACG CCGCAGCCCG TGACGGTGCG CGACAAGGAT
TTCGGCATGA TCCGCCTGCG CGCCTTTGGC GTGTACGCCT ACCACGTGGC CGATCCGAAG
CTCTTCTACC AGCAGGTGAG CGGCACACGC GACATCTACA CCGTGGATGA AGTCGAGGCG
CAACTCGCCC CCGTCATCAT GGGTGCGATG GCGACGGCGT TTGGCGAATC CGGCGTGCCC
TTCCTGGACC TGGCCGCCAA CCAGATGCTG ATGTCGAACA AGGTGCGCGA GGCGCTGCTG
CCGCAGTTCA CGCAGTACGG CCTGGCGCTC GACAGCTTCC AGGTGTCCAG CGTCACGCTG
CCGGACGAAC TGCAGGCCGC GCTGGACCGC CGGATCAGCA TGGACATGAC CGGCGACATG
CAGCGCTTCA CGCAATACCA GACGGCCGAA TCGCTGCCGC TGGCGGCACG CAACGAAGGC
GGCATCGCCG GTACGGGTGC GGGTTTGGCG GCAGGGCTGG CAATGGGCCA GGCGATGGCC
GACAGCCTGC GTACCGCTGT GCAGGGCAAC GCTGGCGGTG CGGCTGCTCC TGCAGCGCAA
TCTGCCGCCG CCGTCCCAGC TGCTCCGGCA GCGGACGACC CCACCGCACG CCTGGCCAAG
CTCAAGGAAC TGCTCGACAA GGGCCTCATC ACGCAAGCGG ACTTCGATGC CGGCAAGGCT
GCCGTGCTGA AGGCGCTGAC CGGAGGCTGA
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| Protein sequence | MSLSSFIKKQ FIDILQWTES EDGVLAWRYP MQDMEIQNGG TLVVRDSQMA MFVNEGQIAD
VFGAGTFKLT TQTLPVLTYL KNWDKLFESP FKSDVYYFST RQQLGRRWGT PQPVTVRDKD
FGMIRLRAFG VYAYHVADPK LFYQQVSGTR DIYTVDEVEA QLAPVIMGAM ATAFGESGVP
FLDLAANQML MSNKVREALL PQFTQYGLAL DSFQVSSVTL PDELQAALDR RISMDMTGDM
QRFTQYQTAE SLPLAARNEG GIAGTGAGLA AGLAMGQAMA DSLRTAVQGN AGGAAAPAAQ
SAAAVPAAPA ADDPTARLAK LKELLDKGLI TQADFDAGKA AVLKALTGG
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