Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4084 |
Symbol | |
ID | 6285448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 359364 |
End bp | 360023 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618573 |
Product | isochorismatase hydrolase |
Protein accession | YP_001892614 |
Protein GI | 187926269 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA ACAACACCCC GAAGCGCGCC CTGATCGTCA TCGATGTGCA GAACGAATAT TTCACCGGCG GCCTGCCGAT CGAGTATCCG GACCCGCAGC AGACCGTCGC AAACATCGGC GTCGCCATGG ATGCGGCACG CGAGGCGGGC ATTCCGGTGA TCGTCGTGCA GCAGACCTCG CCGGCCAGCT CGCCGCTGTT TGCCATTGAT ACCGACGGCT GGCAACTGCA CCCCGTGGTG GCGTCGCGTC CGCATGACCA CTATCTGCGC AAGCTGCTGC CCAGCGCCTA TCCGGAGACG GACCTGGCGC AATGGCTGGA AGCCCGCGGC ATCGATACGC TCACCGTGGT GGGCTACATG ACGCACAACT GCGATGCATC CACGATCAAC CACGCCCTGC ACAACGGCAC GGCGGTGGAG TTTCTGCATG ACGCGTCGGG CGCGGTGCCG TATCAAAACC AGGCCGGCTT TGCGAGTGCG GAAGAGATCC ACCGCGTGTT CAGCGTGGTG CTGCAATCGC GCTTCGCGGC GGTCATGTCG ACCCAGGAAT GGGTGCACAG CGTGAAGACC GGCGCGGTGC CCGTGCGCGA CAATATCTAC AAGTCGAATC AGCGGGCCCG TGGGCTGCTC AAGGATGAGG TGGCGCAGCG GGCAGCGTGA
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Protein sequence | MTTNNTPKRA LIVIDVQNEY FTGGLPIEYP DPQQTVANIG VAMDAAREAG IPVIVVQQTS PASSPLFAID TDGWQLHPVV ASRPHDHYLR KLLPSAYPET DLAQWLEARG IDTLTVVGYM THNCDASTIN HALHNGTAVE FLHDASGAVP YQNQAGFASA EEIHRVFSVV LQSRFAAVMS TQEWVHSVKT GAVPVRDNIY KSNQRARGLL KDEVAQRAA
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