Gene Rpic_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4067 
Symbol 
ID6285413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp337945 
End bp340071 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content65% 
IMG OID642618556 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001892597 
Protein GI187926252 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.67458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CACTGCTCCG AGTCACCGAC ATCCTGCGCA AGGGCGACTA CCGCTCCGCC 
GCGGGCCCGG TGCTCATCAT CCTGATCCTG GCGATGATGG TGCTGCCATT GCCGCCGTTC
ATCCTGGACC TGCTGTTCAC CTTCAACATC GCGCTGTCGA TCATCGTGCT GCTGATCAGC
ATGCACACGC TCAAGCCGCT GGATTTCTCG TCGTTCCCGA GCATCCTGCT GATCACCACG
CTGATGCGGC TGTCGCTGAA CGTGGCGTCC ACGCGTGTAG TGCTGATGGA AGGCCACACC
GGCCCCGACG CCGCCGGCAA GGTGATCGAG GCGTTTGGCC ACTTCCTCGT GGGCGGCAAC
TACACCGTCG GCATCGTGCT GTTCGTCATC CTGGTGATCA TCAACTTCAT GGTGATCAGC
AAGGGCGCGG GCCGGATCGC CGAGGTCAGC GCGCGCTTCA CGCTCGATGC GATGCCCGGT
AAGCAGATGG CCATCGACGC CGACCTGAAC GCCGGCCTCA TCCGTGAAGA CGAAGCCCGC
AGGCGCCGCA CGGAGATCGC CCAGGAAGCC GAATTCTTCG GCTCCATGGA CGGTGCCAGC
AAGTTCGTGC GCGGCGACTC GGTGGCGGGT ATCGCCATCC TGTTGATCAA CATCGTCGGC
GGCCTGGCGG TGGGCGTGCT CCAGCACGGC ATGGACGTGG GCCACGCGGC CACCAACTAC
ACGCTGCTGA CCATCGGCGA CGGCCTGGTC GCGCAGATTC CCGCGCTGGT GATCTCCACC
GCGGCGGGCA TCATGGTCAG CCGCGTCTCC ACCGACAAGG ACGTCGGCCA GCAACTGTCG
AGCGAGCTGT TTGCCATGCC GACGGTGCTG ATGACCACCG CCGGCGTGCT GGGCCTGCTG
GGCCTGGTGC CGGGCATGCC GCACTTCCCG TTCATCCTGT TTGGGGGCGG CCTTGGCTAT
CTGGGCTGGT ACCTGAAGAA GAAGCGCGAA GTGCCCGAGA TCGAGCCCGT GCTGCAGGCC
ATTGCCCCGG TGGATACGCC CGAAGCGAGC TGGGACGACG TGTCGTGGGT CGACGTGCTG
GGCCTGGAAA TCGGTTACCG CTTGATCCCG CTGGTCGACA AGAGCCAGGA CGGCGAGCTG
CTGCGCCGCA TCAAGGGCAT CCGCAAGAAA TTCACGCAGG ACATGGGCTT CCTGGCGCCG
GTGGTGCATA TCCGCGACAA CCTGGAGCTG GGCCCATCGT CGTACCGCAT CACGCTCAAG
GGCGTGGAGA TCGGCCACGG CGAGGTGCAG CAGGGCAAGT TCCTGGCCAT CAATCCGGGC
GGCCAGGATG GCATGGGCGG TCATGGCGGC ATGGGTGGCC TCGGTGGTCG ACTGGGCACG
CAACTGCCCG GCACGCCCAC CGTGGACCCG ACCTTTGGCC TGCCGGCCAT GTGGATCACC
GCCGATGTGC GCGATCGCGC GCAGGCCGAG GGCTACACCG TGGTCGATTG CAGCACCGTC
ATCGCCACCC ACGTCAATCA GTTGATTTAC ACCCATAGCA CCGAGCTTCT CGGCCGTTTG
GAAGTCCAGC AGTTGCTCGA TCATTTGGGC AAGGAAGCAC CGAAGCTGGT CGAAGACGTT
GTACCCAAGC TGTTGCCCGT CGCGACCGTG CAGAAGGTGC TGCAGAACCT GCTGGACGAA
GGCCTGCATA TCCGCGATAT CCGCACCATC GTCGAGACGC TGGCGGAACA CGGAGGCAGG
ACGCAAGACC CCGCCGAACT CACCGCCGCC GTGCGTGTGG CGCTGGGCCG GGCGATTGCC
CAGCAGCTCT TCCCGAACAA GACCGAAATG CAGGTCGTCA CGCTTGACCC GAATCTGGAG
AACATCTTGC TGCAAAGCGT CGTTGGCTCT AACGCCGGCC CGATCGAACC GCAACTGGCC
GACTCGCTCA TGCAGGCGGC AGCGGACTCG TCGCGGCAGC ACGAACAGAT GGGTCAGACG
GGCGTCCTGC TCGTGCCGCC CGCACTGCGC CCGATGCTTG CCCGCCTGTT CAAGCGTGCC
GCACCGAGCC TGCGCGTGCT GTCGCACGCA GAAATTCCGG ATCACCGAAC GATTAAGGTT
GTCGCCATGC TTGGAGGCCG CGCATGA
 
Protein sequence
MNAALLRVTD ILRKGDYRSA AGPVLIILIL AMMVLPLPPF ILDLLFTFNI ALSIIVLLIS 
MHTLKPLDFS SFPSILLITT LMRLSLNVAS TRVVLMEGHT GPDAAGKVIE AFGHFLVGGN
YTVGIVLFVI LVIINFMVIS KGAGRIAEVS ARFTLDAMPG KQMAIDADLN AGLIREDEAR
RRRTEIAQEA EFFGSMDGAS KFVRGDSVAG IAILLINIVG GLAVGVLQHG MDVGHAATNY
TLLTIGDGLV AQIPALVIST AAGIMVSRVS TDKDVGQQLS SELFAMPTVL MTTAGVLGLL
GLVPGMPHFP FILFGGGLGY LGWYLKKKRE VPEIEPVLQA IAPVDTPEAS WDDVSWVDVL
GLEIGYRLIP LVDKSQDGEL LRRIKGIRKK FTQDMGFLAP VVHIRDNLEL GPSSYRITLK
GVEIGHGEVQ QGKFLAINPG GQDGMGGHGG MGGLGGRLGT QLPGTPTVDP TFGLPAMWIT
ADVRDRAQAE GYTVVDCSTV IATHVNQLIY THSTELLGRL EVQQLLDHLG KEAPKLVEDV
VPKLLPVATV QKVLQNLLDE GLHIRDIRTI VETLAEHGGR TQDPAELTAA VRVALGRAIA
QQLFPNKTEM QVVTLDPNLE NILLQSVVGS NAGPIEPQLA DSLMQAAADS SRQHEQMGQT
GVLLVPPALR PMLARLFKRA APSLRVLSHA EIPDHRTIKV VAMLGGRA