Gene Rpic_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4060 
Symbol 
ID6285397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp329452 
End bp332115 
Gene Length2664 bp 
Protein Length887 aa 
Translation table11 
GC content64% 
IMG OID642618549 
ProductFMN-binding domain protein 
Protein accessionYP_001892590 
Protein GI187926245 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.034524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGTG CGGGCCCGCG CGTGCCGATG AACTCCAAGA TGCCATCCCG AAAACAAGGG 
TTCGCGGCGT GGGTCGCCGT GTTCCTCCTG ATGCTGTTGG TGGGCGTGCA ACCGGCGCAG
GCCGGTCGCG GCGCCTACGA AGCCGAGTTG CCCGCCAATC TGGCCGAGGC CAAGGACCTG
TGCGCGCTCG TACCTTGCGC CGACGTGTTT CCCGGCGCGG TGCGTTTTTC CGAACGCATG
GGGCAACCGC CTTATGTGGA AGCCTATGGC GCAGCGCAAG GCGGTAAGGC GGCGCTGCTG
GGCTACGTGA TGCTGTCCAC CGACATCACG GACATCCCGG CCTATTCGGG CAAGCCCGTG
GTCACGCTGA TCGGCATGGA CCGGCAAGGC CGCTATGTCG GCATCAAGGT CCTGAAGCAT
TCCGAGCCGA TCCTGCTGCT GGGGATTCCC GAATCTGCGC TGCTGAACTT CAACAAGCAG
TACATCGGCA AGTCGGTCAA GGACAAGATC GAAGTCGGTC AGTCACGGCC AGACGAGGGT
GTGCTTGGCG TCGATGCGAT CTCGGGCGCC ACCGTGACCG TGATTGCGCA GAACCAGGTG
CTGGCCACAG CCACATCTTC CGTGGCGCGT CAGGTTGGCA TTCTGGCGCC AACGCGCCAT
GAGCCCGCGC GCTATGCGCA GACCGGGCAG CGTGCAAGCT GGGCAGAACT CGTCAAGCAG
GGCAGCGTGC AGCGCTTGCT GATCCGGCCC GAACAGCTTG GGCTCGAACG CGCGCCGGAA
CCGTTCATTG AACTGTGGTT CGGTGATCTC AATCATCCCG ACCTGGGTGC GAGCCTGCTC
GGCCAATCCG TCTGGAACGA CCTGCACGCT CAGCTCAAGC AGAACGAGCA TGCGATCTTC
GTCATCCGCA CCGCGGGCGC GGCGTCGTTC AAGGGGTCGG GCTTCGTACG CGGCGGCATC
TATGACCGCA TCCAGATCAA GCAAGGCGCG GAGTCCTTTA CCTTCCGCGA TTCGGACTAC
CTCAACCTCT ATGGCCTGGC AGCCCCTGGC GCGCCGGCCT ACACGGAATC GGCCATCTTC
GTGGTGCGCT CGCCAGCGTT TTCGGCGGCG TATCCGTGGA AGCTGTCCTT CCTGGGCAAC
CGCGTCGATC GGGCGACCGG CACGCGCAGC TTTGTTACGT TCGATGCCCC GTACTGGTTG
CCCGAAACGC TGCTGCAGGG CGGGCACCCG CATATCGACG AGCCGGAGGC CCCCTGGCGG
CGGGTCTGGC GTACGCGCGC GCCGCAGATT GCACTCTTCA TCGTGCTGCT CGTTTCGGTG
AGCGTGGTGT ATGCGCTGCG TGAGCGCCTG ACGCGCCGTT CGACGCACAA GAACAAGTGG
CCGGTGAACG CCTTCAAGTA CACCGCGTGG GCCCTGAGCA TCGGCTTCGT CGGTTTCGGT
GCGATGGCGC AGCCGTCGAT CACGCAAGTG CTGACATGGT TCCACTCGCT GCTGTTCCAG
TGGACGTGGT CGCTGTTCCT GACGGATCCG TTCATCTTCT GCTTCTGGAT CTTCATCATC
CTGACGGTGT TCCTCTTTGG GCGAGGGCTG TTCTGCGGAT GGCTGTGCCC GTTCGGCTCG
CTGTCGGAAG CGCTCTACAA GATTGGCGGA CGGCTCGGCC TCAAACGCTG GCAGCGTCAT
CTGCCGCGTG CCTGGCACGA CAAGCTGAAG TGGCTCAAGT ACGCCATCTT CTTCGGGTTG
TTGACGGTGT CGGTGTTCTC GATGGGGCTG GCAGAAAAGC TTGCCGAGGT GGAACCGTTC
AAGACGACAT TCCTGGTCGG CATCAGCCAC CGAGCGTGGC CCTACGGGCT GTTCGTCTGC
ACGCTGCTCG GGATCTCGCT GTTTGTCGAG CGCCCGTACT GCAAGTACAT CTGCCCGCTG
GGTGCCGCGC TTGCCATGCC GAGCACGTTC CGCTGGTTTG GCCTGCGCCG CAAGCAAGAC
TGCAACAGTT GCAAGGCCTG CGCCGTCGGT TGCGGGTCTT TGGCGATCGA CGCGGACGGC
CGTATCGACC ATCGCGAATG CCTGCACTGC CTCGATTGCA TGGTGCTGTA CACCGACGTC
AAGGGCTGCC CGCCGCTTGC CAAGGAGCGC AAGCGGCGCG AGCGCGATGG GCTGGAGATC
ACGCCCATCG GCAAGGACGG CTACTTCATT CCCATCCAGC CGGTGCCGGT GCCCATGAAC
CCGCGGGTGG CGCAAGGCCC CGACCCGCGC ATGCCGACCG ACCGCGTGGT GCCGACCGGA
CGCGAAGGTG CGCGTGGCCT GCGCTGGCTG ATGTTGGAAT TGCGCGATCA CCTCTGGCCG
TGGAGCAGCA ACGGGTGGAG GTCGGCGCGC GGCCTGCAGA TCGCGGGGGC TTCGCTTGCG
CTGGCAGCGA GCGTGGCATG GATCCTGGCG GCGACGGGCC ACCTGTCGTC GGGCGCGGTC
ATCGCATGGT GGTTCGGCTG GAGCCTGTAT GAAGTGCTGA TCCGCCTTGC CGGCCGTCGC
TACGTCAAGG ATGGCCCGTG GTGGCAAGCC AATTATCGGC GCGCAACCGT CATGGACATG
CTGAGCTACG TCGGCTTCAA GAACCTGCTG ATTGGCGCCA TGCTGTTCCT GACCCTGAAA
GCGCTGGGGT GGCTGCAGGT ATGA
 
Protein sequence
MPRAGPRVPM NSKMPSRKQG FAAWVAVFLL MLLVGVQPAQ AGRGAYEAEL PANLAEAKDL 
CALVPCADVF PGAVRFSERM GQPPYVEAYG AAQGGKAALL GYVMLSTDIT DIPAYSGKPV
VTLIGMDRQG RYVGIKVLKH SEPILLLGIP ESALLNFNKQ YIGKSVKDKI EVGQSRPDEG
VLGVDAISGA TVTVIAQNQV LATATSSVAR QVGILAPTRH EPARYAQTGQ RASWAELVKQ
GSVQRLLIRP EQLGLERAPE PFIELWFGDL NHPDLGASLL GQSVWNDLHA QLKQNEHAIF
VIRTAGAASF KGSGFVRGGI YDRIQIKQGA ESFTFRDSDY LNLYGLAAPG APAYTESAIF
VVRSPAFSAA YPWKLSFLGN RVDRATGTRS FVTFDAPYWL PETLLQGGHP HIDEPEAPWR
RVWRTRAPQI ALFIVLLVSV SVVYALRERL TRRSTHKNKW PVNAFKYTAW ALSIGFVGFG
AMAQPSITQV LTWFHSLLFQ WTWSLFLTDP FIFCFWIFII LTVFLFGRGL FCGWLCPFGS
LSEALYKIGG RLGLKRWQRH LPRAWHDKLK WLKYAIFFGL LTVSVFSMGL AEKLAEVEPF
KTTFLVGISH RAWPYGLFVC TLLGISLFVE RPYCKYICPL GAALAMPSTF RWFGLRRKQD
CNSCKACAVG CGSLAIDADG RIDHRECLHC LDCMVLYTDV KGCPPLAKER KRRERDGLEI
TPIGKDGYFI PIQPVPVPMN PRVAQGPDPR MPTDRVVPTG REGARGLRWL MLELRDHLWP
WSSNGWRSAR GLQIAGASLA LAASVAWILA ATGHLSSGAV IAWWFGWSLY EVLIRLAGRR
YVKDGPWWQA NYRRATVMDM LSYVGFKNLL IGAMLFLTLK ALGWLQV