Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4060 |
Symbol | |
ID | 6285397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 329452 |
End bp | 332115 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618549 |
Product | FMN-binding domain protein |
Protein accession | YP_001892590 |
Protein GI | 187926245 |
COG category | [K] Transcription |
COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.034524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCGTG CGGGCCCGCG CGTGCCGATG AACTCCAAGA TGCCATCCCG AAAACAAGGG TTCGCGGCGT GGGTCGCCGT GTTCCTCCTG ATGCTGTTGG TGGGCGTGCA ACCGGCGCAG GCCGGTCGCG GCGCCTACGA AGCCGAGTTG CCCGCCAATC TGGCCGAGGC CAAGGACCTG TGCGCGCTCG TACCTTGCGC CGACGTGTTT CCCGGCGCGG TGCGTTTTTC CGAACGCATG GGGCAACCGC CTTATGTGGA AGCCTATGGC GCAGCGCAAG GCGGTAAGGC GGCGCTGCTG GGCTACGTGA TGCTGTCCAC CGACATCACG GACATCCCGG CCTATTCGGG CAAGCCCGTG GTCACGCTGA TCGGCATGGA CCGGCAAGGC CGCTATGTCG GCATCAAGGT CCTGAAGCAT TCCGAGCCGA TCCTGCTGCT GGGGATTCCC GAATCTGCGC TGCTGAACTT CAACAAGCAG TACATCGGCA AGTCGGTCAA GGACAAGATC GAAGTCGGTC AGTCACGGCC AGACGAGGGT GTGCTTGGCG TCGATGCGAT CTCGGGCGCC ACCGTGACCG TGATTGCGCA GAACCAGGTG CTGGCCACAG CCACATCTTC CGTGGCGCGT CAGGTTGGCA TTCTGGCGCC AACGCGCCAT GAGCCCGCGC GCTATGCGCA GACCGGGCAG CGTGCAAGCT GGGCAGAACT CGTCAAGCAG GGCAGCGTGC AGCGCTTGCT GATCCGGCCC GAACAGCTTG GGCTCGAACG CGCGCCGGAA CCGTTCATTG AACTGTGGTT CGGTGATCTC AATCATCCCG ACCTGGGTGC GAGCCTGCTC GGCCAATCCG TCTGGAACGA CCTGCACGCT CAGCTCAAGC AGAACGAGCA TGCGATCTTC GTCATCCGCA CCGCGGGCGC GGCGTCGTTC AAGGGGTCGG GCTTCGTACG CGGCGGCATC TATGACCGCA TCCAGATCAA GCAAGGCGCG GAGTCCTTTA CCTTCCGCGA TTCGGACTAC CTCAACCTCT ATGGCCTGGC AGCCCCTGGC GCGCCGGCCT ACACGGAATC GGCCATCTTC GTGGTGCGCT CGCCAGCGTT TTCGGCGGCG TATCCGTGGA AGCTGTCCTT CCTGGGCAAC CGCGTCGATC GGGCGACCGG CACGCGCAGC TTTGTTACGT TCGATGCCCC GTACTGGTTG CCCGAAACGC TGCTGCAGGG CGGGCACCCG CATATCGACG AGCCGGAGGC CCCCTGGCGG CGGGTCTGGC GTACGCGCGC GCCGCAGATT GCACTCTTCA TCGTGCTGCT CGTTTCGGTG AGCGTGGTGT ATGCGCTGCG TGAGCGCCTG ACGCGCCGTT CGACGCACAA GAACAAGTGG CCGGTGAACG CCTTCAAGTA CACCGCGTGG GCCCTGAGCA TCGGCTTCGT CGGTTTCGGT GCGATGGCGC AGCCGTCGAT CACGCAAGTG CTGACATGGT TCCACTCGCT GCTGTTCCAG TGGACGTGGT CGCTGTTCCT GACGGATCCG TTCATCTTCT GCTTCTGGAT CTTCATCATC CTGACGGTGT TCCTCTTTGG GCGAGGGCTG TTCTGCGGAT GGCTGTGCCC GTTCGGCTCG CTGTCGGAAG CGCTCTACAA GATTGGCGGA CGGCTCGGCC TCAAACGCTG GCAGCGTCAT CTGCCGCGTG CCTGGCACGA CAAGCTGAAG TGGCTCAAGT ACGCCATCTT CTTCGGGTTG TTGACGGTGT CGGTGTTCTC GATGGGGCTG GCAGAAAAGC TTGCCGAGGT GGAACCGTTC AAGACGACAT TCCTGGTCGG CATCAGCCAC CGAGCGTGGC CCTACGGGCT GTTCGTCTGC ACGCTGCTCG GGATCTCGCT GTTTGTCGAG CGCCCGTACT GCAAGTACAT CTGCCCGCTG GGTGCCGCGC TTGCCATGCC GAGCACGTTC CGCTGGTTTG GCCTGCGCCG CAAGCAAGAC TGCAACAGTT GCAAGGCCTG CGCCGTCGGT TGCGGGTCTT TGGCGATCGA CGCGGACGGC CGTATCGACC ATCGCGAATG CCTGCACTGC CTCGATTGCA TGGTGCTGTA CACCGACGTC AAGGGCTGCC CGCCGCTTGC CAAGGAGCGC AAGCGGCGCG AGCGCGATGG GCTGGAGATC ACGCCCATCG GCAAGGACGG CTACTTCATT CCCATCCAGC CGGTGCCGGT GCCCATGAAC CCGCGGGTGG CGCAAGGCCC CGACCCGCGC ATGCCGACCG ACCGCGTGGT GCCGACCGGA CGCGAAGGTG CGCGTGGCCT GCGCTGGCTG ATGTTGGAAT TGCGCGATCA CCTCTGGCCG TGGAGCAGCA ACGGGTGGAG GTCGGCGCGC GGCCTGCAGA TCGCGGGGGC TTCGCTTGCG CTGGCAGCGA GCGTGGCATG GATCCTGGCG GCGACGGGCC ACCTGTCGTC GGGCGCGGTC ATCGCATGGT GGTTCGGCTG GAGCCTGTAT GAAGTGCTGA TCCGCCTTGC CGGCCGTCGC TACGTCAAGG ATGGCCCGTG GTGGCAAGCC AATTATCGGC GCGCAACCGT CATGGACATG CTGAGCTACG TCGGCTTCAA GAACCTGCTG ATTGGCGCCA TGCTGTTCCT GACCCTGAAA GCGCTGGGGT GGCTGCAGGT ATGA
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Protein sequence | MPRAGPRVPM NSKMPSRKQG FAAWVAVFLL MLLVGVQPAQ AGRGAYEAEL PANLAEAKDL CALVPCADVF PGAVRFSERM GQPPYVEAYG AAQGGKAALL GYVMLSTDIT DIPAYSGKPV VTLIGMDRQG RYVGIKVLKH SEPILLLGIP ESALLNFNKQ YIGKSVKDKI EVGQSRPDEG VLGVDAISGA TVTVIAQNQV LATATSSVAR QVGILAPTRH EPARYAQTGQ RASWAELVKQ GSVQRLLIRP EQLGLERAPE PFIELWFGDL NHPDLGASLL GQSVWNDLHA QLKQNEHAIF VIRTAGAASF KGSGFVRGGI YDRIQIKQGA ESFTFRDSDY LNLYGLAAPG APAYTESAIF VVRSPAFSAA YPWKLSFLGN RVDRATGTRS FVTFDAPYWL PETLLQGGHP HIDEPEAPWR RVWRTRAPQI ALFIVLLVSV SVVYALRERL TRRSTHKNKW PVNAFKYTAW ALSIGFVGFG AMAQPSITQV LTWFHSLLFQ WTWSLFLTDP FIFCFWIFII LTVFLFGRGL FCGWLCPFGS LSEALYKIGG RLGLKRWQRH LPRAWHDKLK WLKYAIFFGL LTVSVFSMGL AEKLAEVEPF KTTFLVGISH RAWPYGLFVC TLLGISLFVE RPYCKYICPL GAALAMPSTF RWFGLRRKQD CNSCKACAVG CGSLAIDADG RIDHRECLHC LDCMVLYTDV KGCPPLAKER KRRERDGLEI TPIGKDGYFI PIQPVPVPMN PRVAQGPDPR MPTDRVVPTG REGARGLRWL MLELRDHLWP WSSNGWRSAR GLQIAGASLA LAASVAWILA ATGHLSSGAV IAWWFGWSLY EVLIRLAGRR YVKDGPWWQA NYRRATVMDM LSYVGFKNLL IGAMLFLTLK ALGWLQV
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