Gene Rpic_4012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4012 
Symbol 
ID6285305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp280395 
End bp281117 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID642618502 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001892543 
Protein GI187926198 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.696075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG ATCTCCGCCT GCCCCGCTAC CAGCAATTGC GCGACGATCT GGCCGCGCAG 
ATCGCCCAAC AGCACTGGCG CCCGGGCGAC GCCATCCCGA CCGAAGCCGA GCTTGCCAAG
ACGTACAACG TGGCGGTCGG CACCGTCCGC AAAGCCGTAG ACGTACTGGT GGCCGAAGGG
CTGCTCGAAC GCTTCCAGGG CCGTGGCACC TTTGTGCGGC GTGCCAGCTT TGCCAGTTCC
TTGTTCCGCT TCTTCCGCTT CCAGAGTGAA AGCGGCGAGC GGCGCATTCC TGAGAGCCGC
ATCCTCAAGC GGGACGTGCT GGATGCCCCG TCGGCACCGG CTGCAGGCCT GCAGATTGAA
ACCGGCGCAC CGGTCATTCG CCTGACCCGG CTGCGCCTGC TGGATGGCGC ACCCATGCTG
GCCGAAGAAA TCTGGTTGCC ATATGACCGT TTTGCGTCGC TCGCCACGCT GGAACTCAAC
GCGTTTGGCG ACCTGCTGTA TCCGCTGTAC GAATCGCACT GCGGCCAGAT CATTGCGAGC
GCCGAAGAAA CGCTCACCGC CGAAGCCGTC AACGCAACGT ATGCGCGCCT GTTGCGCATC
CAGCCCGGCG ATCCGGTGAT GGTCATCGAA CGCGTTGCGC GCGGCTACGA CCGGGTGCCG
CTCGAATGGC GGCGTTCGCG CGGCGCGGCG GCGCACTTCC GGTACCACGT GGATATCCGG
TAA
 
Protein sequence
MPADLRLPRY QQLRDDLAAQ IAQQHWRPGD AIPTEAELAK TYNVAVGTVR KAVDVLVAEG 
LLERFQGRGT FVRRASFASS LFRFFRFQSE SGERRIPESR ILKRDVLDAP SAPAAGLQIE
TGAPVIRLTR LRLLDGAPML AEEIWLPYDR FASLATLELN AFGDLLYPLY ESHCGQIIAS
AEETLTAEAV NATYARLLRI QPGDPVMVIE RVARGYDRVP LEWRRSRGAA AHFRYHVDIR