Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4009 |
Symbol | |
ID | 6285300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 277326 |
End bp | 278354 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642618499 |
Product | putative periplasmic substrate-binding transmembrane protein |
Protein accession | YP_001892540 |
Protein GI | 187926195 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.368962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAC CCCGCCGCAA CATCCTCCGT TTCACCATGG CCGCCACGCT GGCCGCATCG CTCCTGGCCG GCGCCGTCAG CACCGCGCAT GCTGAAGCCA GCGAAGTCCG CATCTCCCAC GGCTACGGCA TCCTCTACCT GCCCATCATG GTGATGGCCA GTGAGCACCT GCTGGAGAAG CAAGCCAAAG CCGCCGGCCT GGGCGACGTG AAGGTCAGCT ACCGCATCCT GGACGGCGGC AACGTCATCA ACGACGCCAT GCTCTCGGGC GCGCTGGACA TCGCCTCGCT GGGCGTGCCG GGCTTCCTCA CGCTGTGGGA CAAGACGCGC GGCAGCGCGA TAGAAGTGCG CGGGCTCTCG TCGCTCAGCT CCTCGTCGAT GTACCTGATG ACGCGCAACC CGAACGTGAA GACGCTGGCG GATTTCTCCG ACAAGGACCG CATCGCCGTG CCGGGCATCA AGACCTCGCT GCCAGCCGTG GTGCTGCAAA TGGCCGCCGC CAAGACCTTC GGCGACAAGC AGTTCAACAA GCTCGATCCG ATCACCGTGC CGCTGCCGCA CCCTGACGCC ACCGCCGTCA TGCTGGCCGG CGGCAGCCAG ATCAACAGCC ACATGGCCTC GCCACCGTTC TCGTACACCG AGGCTGCTGC ACCCGGCCTG CACCGCGTGT TCAACACGGT CGACGTGCTC GGCAACATCA CGCTGGACAT GACCTACACC AGCAAGAAGT TCTACGAGGC CAACCCGAAG CTGTCGGCGG CGTTCGTGGC GGCGCTGGAT GAGGCGAACG CGCTCATCGC CAAGGACAAG TCGAAGGCTG CGCAGATCTA CATCACTCAA TCGAAGGTGA AGAGTTCGCC GGAAGAGGTG AAGAAGATCC TGGACGATCC GGACTCGCGC TTCACGACCA CGCCGGTGGG CGTCGCACAC TATGCTGAGT TCATGCAGCG CGTGGGTACG CTCAAGAACA AGCCGGCGTC GTGGAAGGAT CTGTTCTTTC CGACGGTGCA GAGCAGACAG GGTTCGTAA
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Protein sequence | MQQPRRNILR FTMAATLAAS LLAGAVSTAH AEASEVRISH GYGILYLPIM VMASEHLLEK QAKAAGLGDV KVSYRILDGG NVINDAMLSG ALDIASLGVP GFLTLWDKTR GSAIEVRGLS SLSSSSMYLM TRNPNVKTLA DFSDKDRIAV PGIKTSLPAV VLQMAAAKTF GDKQFNKLDP ITVPLPHPDA TAVMLAGGSQ INSHMASPPF SYTEAAAPGL HRVFNTVDVL GNITLDMTYT SKKFYEANPK LSAAFVAALD EANALIAKDK SKAAQIYITQ SKVKSSPEEV KKILDDPDSR FTTTPVGVAH YAEFMQRVGT LKNKPASWKD LFFPTVQSRQ GS
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