Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4000 |
Symbol | |
ID | 6285283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 271367 |
End bp | 272344 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618491 |
Product | serine/threonine dehydratase |
Protein accession | YP_001892532 |
Protein GI | 187926187 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC CCATTTCCTA CGACGACGTC GTTGCCGCCC ACGCCCGCCT GCAGGGTGTC GCCCACAAGA CGCCGGTGCT GACCTCTGCC ACCGCCAACG CCATGACCGG CGCCGAACTG TTCTTCAAGG CCGAGAGCTT TCAGCGCATG GGCGCGTTCA AGTTTCGTGG GGCGTACAAC GCGCTGTCGC AATTCACGCC GGAGCAGCGC AGGGCCGGCG TGATCACGTT CTCGTCGGGC AACCACGCGC AGGCGATTGC GTTGTCGGCC AAGCTGCTCG GCATGCGCGC CGTCATCGTC ATGCCGAAGG ACGCGCCTGT CGTGAAGGTG GAGGCCACGC GTGGCTACGG CGGCGAGGTG GTGTTCTTCG ACCGCTACAC CGAAGACCGC GAAGCCATCG GCCGCCAACT GGCCGAAGAA CACGGCCTTA CGCTGATCCC GCCGTACGAC CATCCGCACG TGATGGCCGG GCAGGGCACG GCTGCCAAGG AACTGATCGA AGAGGTCGGC CCACTGGATG TGCTGCTGGC CCCGCTGGGC GGTGGCGGTC TGCTCTCCGG CTGCGCCACG GCGGCGCGCG CGCTGAACCC GGCGTGCAAG ATCTTCGGCG TGGAGCCCGA GGCAGGCAAC GACGGTCAGC AGAGCTTGCG CAAGGGCGAG ATCGTCCACA TCGATACACC CAAGACGCTG GCCGACGGCG CGCAGACGCA GCACCTGGGC AACTACACGT TTGCCGTGAT TCGCGAACTG GTTGACGACA TCGTGACCGT GAGCGATGCA GAACTCGTCA GCGCCATGCA GTTTTTCGCC TCGCGTATGA AGGCGGTGGT CGAGCCCACC GGCTGCCTGG CTGCAGCTGC GGTGCTGAAC GGCAAGGTCG ATGTGCGAGG CAAGCGCGTC GGCGTGATCC TGTCGGGCGG CAATGTGGAT CTGCAACTCT TCGCCAAGCT TGTGCTGGGC GCGGAGGCAG CGAAATGA
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Protein sequence | MSLPISYDDV VAAHARLQGV AHKTPVLTSA TANAMTGAEL FFKAESFQRM GAFKFRGAYN ALSQFTPEQR RAGVITFSSG NHAQAIALSA KLLGMRAVIV MPKDAPVVKV EATRGYGGEV VFFDRYTEDR EAIGRQLAEE HGLTLIPPYD HPHVMAGQGT AAKELIEEVG PLDVLLAPLG GGGLLSGCAT AARALNPACK IFGVEPEAGN DGQQSLRKGE IVHIDTPKTL ADGAQTQHLG NYTFAVIREL VDDIVTVSDA ELVSAMQFFA SRMKAVVEPT GCLAAAAVLN GKVDVRGKRV GVILSGGNVD LQLFAKLVLG AEAAK
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