| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3964 |
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| Symbol | mdoD |
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| ID | 6285213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 221728 |
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| End bp | 223341 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642618455 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001892496 |
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| Protein GI | 187926151 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACAC GTCGAACCCT TCTTGCCTCC GCCTCGGTTA CCGCCACGCT GGCGGCGCTC
GGCATCACGC CCGAAGCACT GGCCGCCGAT CGCGTCAAGC TGGGCGATGC CGCGCCGTTT
TCTTTCGATG CGCTGATCGA GCGCGCCCGC ACGATGGCCG GCAAGCCTTA CACGCCCCCT
GCAACGGCGC CGGCCGACAT CCTGTCCAAG ATCGACTACG AGGCACACGG CAAGATCAAA
TTCGACACCG CCCACGCACT CTTTGCGGAC GGCCCCGGCC AGTTTCCGGT GACGTTCTTC
CACCTCGGCA CGTTCTTCCG CGCCCCGGTG CGCATGCACG TGGTGGAAAA AGGCGCCGCC
CGCGAAATCG TTTACGACGA ATCGTACTTC GACATGCCCG CCGACAGCCC GGCGCGCAAA
CTGCCGCGCG GCAGCGGCTT TGCCGGTTTC CGCTTCCAGG AAAGCCGCCT GGGTGACCAG
AAGAAACTCG ACTGGAAGAA GAACGATTGG GTCGCCTTCC TGGGCGCGTC GTACTTCCGC
GCCATCGGCG AGCTGTATCA GTACGGGCTT TCCGCACGGG GCATTGCGCT GGACGTGGCG
CAGGCCGGCA AGCCGGAAGA GTTTCCCAAT TTCACGCACG TGTGGTTCGA CACGCCGGCA
GACAACCGCG CCGATTCCGT GACGATCTAC ACGCTGCTCG ACGGCCCGAG CATCACGGGT
GCATATCGCT TTGTCATGCA CCGCACGAAG GGCGTGGTGA TGGACATCGA CACGGCCATC
TTCCTGCGCA AGGACGTCGA CCGTTTCGGC ATCGCGCCCG CCACGTCGAT GTACTGGTTT
TCGGAAACCG CCAAGGGCAC CGCCACTGAC TGGCGCCCCG AGGTGCACGA CTCCGACGGC
CTCGCCCTCT GGACCGGCAA TGGCGAGCGC ATCTGGCGCC CGCTGAATGA TCCGCCGCGC
ACGATGGCGT CTGCCTTTGG CGACAACAAC CCGCGCGGCT TCGGCCTGCT GCAGCGCGAT
CGCGATTTCA ACAACTACCA GGACGGCGTC CACTACGAGC GCCGCCCGAG CCTGTGGGTC
GAGCCGCTGG AAGGCTGGGG CGAGGGCGCC GTGCAGCTTA TCGAAATCCC GACCGACGAC
GAGATCCACG ACAACATCGT CGCCATGTGG GTGCCGAAGG CACCGGCGCG TGCGGGCAGC
CAGTACCGTC TACGCTATCG CCTGCACTGG CTGGCCGATG AACCGTATCC GACACAACTG
GCGCGCTGCG TGGCCACGCG CATGGGCAAC GGCGGGCAGC CGGGCCAGCC GCGGCCGCGC
GGCGTGCGCA AATTCATGGT CGAGTTCAAG GGCGGTCCGC TGGAGAAACT GCCTTTCGGC
ACCAAGCCGG AGGCCGTGCT GAGCACCTCG CGCGGCACGT TCTCGTATGT GTTTACCGAA
GCCGTGCCGA ACGGCGTGCC GGGCCACTGG CGCGCCCAGT TCGACCTGAC GGTCGACGGG
AAGGAACCGG TCGACATGCG GCTGTTTTTG CGTGTGGATG GCAAGCCGCT GTCCGAGACG
TGGCTGTATC AATATCACCC GTTCCAATCG CCGGTGGGGC CAGTGGCGTC CTAA
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| Protein sequence | MVTRRTLLAS ASVTATLAAL GITPEALAAD RVKLGDAAPF SFDALIERAR TMAGKPYTPP
ATAPADILSK IDYEAHGKIK FDTAHALFAD GPGQFPVTFF HLGTFFRAPV RMHVVEKGAA
REIVYDESYF DMPADSPARK LPRGSGFAGF RFQESRLGDQ KKLDWKKNDW VAFLGASYFR
AIGELYQYGL SARGIALDVA QAGKPEEFPN FTHVWFDTPA DNRADSVTIY TLLDGPSITG
AYRFVMHRTK GVVMDIDTAI FLRKDVDRFG IAPATSMYWF SETAKGTATD WRPEVHDSDG
LALWTGNGER IWRPLNDPPR TMASAFGDNN PRGFGLLQRD RDFNNYQDGV HYERRPSLWV
EPLEGWGEGA VQLIEIPTDD EIHDNIVAMW VPKAPARAGS QYRLRYRLHW LADEPYPTQL
ARCVATRMGN GGQPGQPRPR GVRKFMVEFK GGPLEKLPFG TKPEAVLSTS RGTFSYVFTE
AVPNGVPGHW RAQFDLTVDG KEPVDMRLFL RVDGKPLSET WLYQYHPFQS PVGPVAS
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