Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3951 |
Symbol | |
ID | 6285178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 211233 |
End bp | 212822 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618442 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_001892483 |
Protein GI | 187926138 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.226395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA ACCTGCCGGT CACCCAAGCC GAAACCGCCC TCAACCCGAC GGACTACCTC ATCTCCCGCA CCGATCTCAA AGGCCTCATC GTCTTCGCCA ACCCGGCGTT CGTGCGCATC AGTGGTTATG CGCACGACGA ACTGATGGGG GCGCCGCACA ACCTCGTGCG CCACCCGGAC ATGCCCGAAG CCGCCTTCGC CGACTTGTGG GCCACGCTGC AGGCCGGCAA GCCGTGGCGC GGCTTCGTCA AGAACCGCCG CAAGGACGGC GGCTTCTACT GGGTGCTGGC CAACGTGACG CCGGTGTTTC AGAACAACGC GGTGGTCGGC TATACGTCGG TGCGTTCGAT GGCCATGCCC GCGCAGATCG CACGCGCACA ACGCGCCTAT ACCGCGATCA ACGAAGGCGA CACGTCGTAC ACCGTGCGCG CCGGCCGCAT TCTGCGCACG GGATGGCGGC GCGTCGTCAA CCTGTTCCAG ATCGACAGCC TGCGCTTCAA GGTGATCGGC CTGCAAACGC TGATTGCATC GGCCATCCTG ATCGGCACGG TGTGGGCGCA CATCGCGCTG GAAGCCGCCG ATCTGCATGG CGCAGCGTGG CTCGTGTTCA GCCGCGATTG GCTGTGGCTC ACCGGCGTGG GTTGCGCCGG GCTGGCAACG ATGTCAGGCG TGCTGCTCGC ACGCACGCTG ATCCGACCAT TGGAAGAAGC CGCGACGCTG GCCACACGCC TGGCTGCCGG CGATCTGACC ACCGTAGTCG AAGCCCGCTC CAGCGACGAG CTGGGCGAAG TCATGCGCGC CATGGGCACC ATGCGCGCAA GCCTGTCGTC CATCGTGCGC GACATCCAGG ACGGCGCCGC CAGCGTCGCC CACAGCACGC AGCAGATTTC CGCCGGCAAC CATGATCTCT CCGCCCGCAC CGAGCAGCAA GCTGCCGCGC TGGAAGAAAC CGCTTCGAGC ATGGAAGAGC TGACATCGAT GGTCGCGCAG AACGCCGACC ACGCCCGCGC CGCCAGCGCC CTTGCCGAGC AGGCCTCCAC CATTGCGGCT GACGGCGGCC AGGTCGTGCA GCGCGTCGTG CAAACCATGG ACGCCATCCG TGCTGACAGC CAGCGCGTGA CCGAGATCAT CGCCACCATC GAGAGCATCG CGTTCCAGAC CAACATCCTT GCGCTCAACG CGGCTGTTGA AGCCGCGCGC GCGGGCGAAG AAGGCCGTGG CTTTGCAGTC GTTGCCGGCG AGGTGCGCAG CCTCGCGCAG CGCAGCGCGC AGGCCGCAGC GCAGAGCAAG GAGATCATCC GCGCATCCGA TCAATCCGTG CGCGACGGCG TGGATCTCGT CCATAAGGCG GGCGCCACCA TGACGCAGAT CGTGCAATCG GTGCAGACCG TCACGCAGCT CATGTCGGAA ATCTCCGCCA GCTCGCGCGA GCAGAGCAGC GGCATCGCGC AGATCAACGC GTCGGTTTCG CAGCTCGATG GGGTCACGCA GCAGAACGCC ACGCTGGTGG AAGAAGCGGC GGCGGCCACC TCGGTGTTGG CACGCCAGTC GGAAGATCTG AAGCACGCCA TCGCGGTGTT CCGCGCATAG
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Protein sequence | MRKNLPVTQA ETALNPTDYL ISRTDLKGLI VFANPAFVRI SGYAHDELMG APHNLVRHPD MPEAAFADLW ATLQAGKPWR GFVKNRRKDG GFYWVLANVT PVFQNNAVVG YTSVRSMAMP AQIARAQRAY TAINEGDTSY TVRAGRILRT GWRRVVNLFQ IDSLRFKVIG LQTLIASAIL IGTVWAHIAL EAADLHGAAW LVFSRDWLWL TGVGCAGLAT MSGVLLARTL IRPLEEAATL ATRLAAGDLT TVVEARSSDE LGEVMRAMGT MRASLSSIVR DIQDGAASVA HSTQQISAGN HDLSARTEQQ AAALEETASS MEELTSMVAQ NADHARAASA LAEQASTIAA DGGQVVQRVV QTMDAIRADS QRVTEIIATI ESIAFQTNIL ALNAAVEAAR AGEEGRGFAV VAGEVRSLAQ RSAQAAAQSK EIIRASDQSV RDGVDLVHKA GATMTQIVQS VQTVTQLMSE ISASSREQSS GIAQINASVS QLDGVTQQNA TLVEEAAAAT SVLARQSEDL KHAIAVFRA
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