Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3937 |
Symbol | |
ID | 6285136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 187897 |
End bp | 190203 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618428 |
Product | glycogen branching enzyme |
Protein accession | YP_001892469 |
Protein GI | 187926124 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.353505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCGC TCGACTTTGC CACCCCAACC AAAACCGCTG CCGAACCCGA AGCACCGGTC GTGCTGCCGC CCGGCCTCGA CCAGATGCAG GTCGATGCGC TGACGCATGG CCGCCTGGGT GACCCGTTTG CAGTGCTGGG GCCGCATCGC CTCGACACTG AAGATGGCCC GCGCTGGGTC GTGCGCGCTT TCTACCCGGG CGCGCGCCGT GTGCAGGCCA TCGACTCGCG CGGCCAGATC ATCACGGAGA TGACGCCGGT GGGCCGGACG GGACTGTTCC ACGGACCCCT GCGCGCCGAT GCACAGGATG TGTATGGCCA CCCGGAGCTG TATCGCCTGC GCGTCATCTG GCCTGCGGGC ACCGGCCATG AAGCCGTGCA GGAAACCGAA GACCCATACG CCTTCGGGCT GCTGCTCGGC GATCTGGACA TGCATCTGCT CAACGAGGGC ACGCATTGGG CGCTGGCAAG CTGCCTGGGC GCGCAGGCGA TGCGCATCGA CGGCATCAGC GGCGTGCGCT TTGCGGTGTG GGCGCCGAAC GCGCAGCGCG TGTCGGTGGT GGGCGAGTTC AACCAGTGGG ACGGCCGTCG CCACCCCATG CGCCTGCGCC ATCAGGCCGG CGTGTGGGAA CTGTTTTTGC CGAGCGGCTT GGGCGTTGGC CCCGGCGCGC GCTACAAGTT CGAACTGATC GGCGCCGACG GCCGGCTGAT GGTCAAGGCC GACCCCGCCG CCCGCCAGAC CGAACCGCCG CCCGCCACCG CCTCCGTCGT GGCCGACCCG GCGCCGCTGC GCTGGAACGA CGACGCGTGG ATGCAAACGC GCGCCGAACG CCAGAAGCCC GACGCGCCCA TCAGCATCTA TGAAGTGCAT GCCGGCTCCT GGCTGCGCGA TCTGGAAGAC GGCGGCCGCA ACCTGCAATG GGATGAGCTG GCCGACCGGC TGATCCCCTA CGTCACGGCG CTCGGCTTCA CGCACATTGA ACTGCTGCCG GTGGCGGAAC ACCCGTTTGG CGGCAGTTGG GGCTATCAGC CGCTGGGGCT GTTCGCACCG TCTGCGCGCT TTGGGGCGCC CGAGGCGTTT GCGCGCTTTG TCGACCGCTG CCATCAGGCT GGCCTGGGCG TCATCGTCGA CTGGGTGCCC GCGCACTTCC CGACCGACGC GCACGGGCTG GCGCAGTTTG ACGGCACCGC GCTGTATGAA CACCAGGACC CGCGCGAAGG CTTCCATCAG GACTGGAACA CGCTCATCTA CAACTTCGGC CGCAACGAAG TGCGCGGATT CCTCATCGCG AGCGGGCTGG AATGGCTGGA GCGGTTCCAC ATTGACGGCC TGCGCGTGGA TGCCGTGGCG TCGATGCTGT ATCGCGACTA CTCGCGCCGC GCCGGCGAAT GGGTCCCCAA CCGCTACGGC GGCCGCGAAA ACCTCGAGGC CGTGGCGTTC ATCCAGAAGA TGAACACGGT CGTGCACGAA CGCTGCCCCG GCGCCATCAC CATCGCCGAA GAGTCGACCG CCTGGCCGGG CGTGACCGCG CCCGTGGAAT TCAACGGCCT GGGCTTCGAC TACAAGTGGA ACATGGGTTG GATGCACGAC ACGCTGCATT ACATGCAGCG CGACCCCGTG TACCGGCAGC ACCATCACGA CGGCATGACG TTCGGGCTGG TGTACGCGTT CTCCGAACAC TTCATCCTGC CGATCTCGCA CGACGAGGTG GTTCACGGCA AGGGCTCGCT GCTGGGCAAG ATGCCCGGCG ATGAGTGGCA ACGGCTGGCG AACCTGCGTG CCTACCTCGC ATTCATGTGG ACGCATCCGG GCAAGAAGCT GCTGTTCATG GGCTGCGAGT TTGGGCAAGT GGGCGAATGG AATCACGACG CATCACCCGA GTGGCATCTG CTGGATGACC CGCGGCACCG TGGCGTGCAG CGGCTGGTGC ATGACCTCAA TGCGCTGTAC CGGAACGAAC CGTCATTGCA TGCGCGAGAC ACCGCGCCCG AAGGGTTCAA CTGGGTGATT GGCGACGACC GCACCAACAG CGTGTTTGCG TTCCTGCGGC TCGACGGCGA AGGGCGGCCG ATGCTCGTGG TGGCGAATAT GACGCCGGTG CCGCGGGAGG GGTATCGCAT TGGCGTGCCG CCGGCGGACG GGGCCACGCA GTGGCGGGAG GTGCTGAACA CGGATGCTGC CGTGTATGGC GGCAGCGATT TCGGGAACGG TGGGGCGGTG GATGTGGACC ACGTGGCGGC GCATGGGCAG GAGCAGTCGT TGGTGTTAAG GCTGCCGCCG TTGGGGGTTG TGGTTTTGAA GGTTTGA
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Protein sequence | MTALDFATPT KTAAEPEAPV VLPPGLDQMQ VDALTHGRLG DPFAVLGPHR LDTEDGPRWV VRAFYPGARR VQAIDSRGQI ITEMTPVGRT GLFHGPLRAD AQDVYGHPEL YRLRVIWPAG TGHEAVQETE DPYAFGLLLG DLDMHLLNEG THWALASCLG AQAMRIDGIS GVRFAVWAPN AQRVSVVGEF NQWDGRRHPM RLRHQAGVWE LFLPSGLGVG PGARYKFELI GADGRLMVKA DPAARQTEPP PATASVVADP APLRWNDDAW MQTRAERQKP DAPISIYEVH AGSWLRDLED GGRNLQWDEL ADRLIPYVTA LGFTHIELLP VAEHPFGGSW GYQPLGLFAP SARFGAPEAF ARFVDRCHQA GLGVIVDWVP AHFPTDAHGL AQFDGTALYE HQDPREGFHQ DWNTLIYNFG RNEVRGFLIA SGLEWLERFH IDGLRVDAVA SMLYRDYSRR AGEWVPNRYG GRENLEAVAF IQKMNTVVHE RCPGAITIAE ESTAWPGVTA PVEFNGLGFD YKWNMGWMHD TLHYMQRDPV YRQHHHDGMT FGLVYAFSEH FILPISHDEV VHGKGSLLGK MPGDEWQRLA NLRAYLAFMW THPGKKLLFM GCEFGQVGEW NHDASPEWHL LDDPRHRGVQ RLVHDLNALY RNEPSLHARD TAPEGFNWVI GDDRTNSVFA FLRLDGEGRP MLVVANMTPV PREGYRIGVP PADGATQWRE VLNTDAAVYG GSDFGNGGAV DVDHVAAHGQ EQSLVLRLPP LGVVVLKV
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