Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3911 |
Symbol | |
ID | 6285057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 155512 |
End bp | 156924 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618404 |
Product | outer membrane efflux protein |
Protein accession | YP_001892445 |
Protein GI | 187926100 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0120008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.391344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCAAAC CATCCACACG CCGCCTCGCC CTGTGCGCGC TGGCCGGCAC GCTGCTGCTG TTGGGAGGCT GCGCCACCAT CACGCAAGAC AGCGGCTTCA AGACCGTTGC CGACGTGGCG CGCGATCGGC TCGGCAAGGA CGCCACGTGG CATCGTTCAC CAGAAGCCCG CGACAGCGCC GCGCAACGCA CGCGCGAGCT GCTCGCCCAG CCGCTGACGA TGGACAGCGC CGTGCAGATC GCGCTGCTGA ACAACCGTGG CCTGCAGGCT TCGTATGCGG AGCTGGGGCT ATCCGAAGCC GCGCTCGTGC AGGCCAGCCG TCTGCCGAAT CCCGGCTTCA GTTTCAAACG CACGCGCAGC GGCGACGACC TGTCGATCGA GCGCACGTTT TCGCTATCTT TTCTGAACCT GCTGACGCTG CCGATGGCCA CGCGCATCGA AGGCCGCTAC TTCGAACAAA CGAAGTTGCT GGTCGCCAAC CAGATGCTGC AGGTGGCGAC CGACACACGC CGCGCGTACA TCAATGCCGT GGCGGCGGAG CAATCGGCGC GCTATGCCGA GCAGGTTCAG CAAGCCGCAG AAGCCGGTGC CGAGTTCGCC AAGCGTCTGG CTTCCGCAGG TAACTTCAGC AAGCTTGATC GTGCACGTGA ACACGCCTTC TATGCGGAAG CCACTGCCAC CCTGGCGCGC ACGCGTCAGC AGGCGCAGGC CGAGCGCGAG GCGTTGATCC GCCTGCTTGG TGTGTGGGGC ACGGATACCG GCTTCAAATT GCCCGAGCGG CTGCCTGACC TGCCGAAGGA TCGCCCCGAG CTGCAGCAGA TCGAGGCCTA TGCGTTGCGC AACCGGCTCG ATATCCAGGC GGGCAGGTTG CAGGTCGATG GCCTGGCATC GTCGCTGGGG CTCACGCAGG CCACGCGCTT CATCAACGTG CTCGACCTCG GCTACGTGCG CAATAGCAAA TCCAACGAAC CACGCGAAAC GGGTTACGAG ATCGGCATCG AGATCCCGCT GTTCGACTGG GGCGGCGCCC GCGTGGCACG TGCGCAGTCG ATCTACATGC AGGCCGCCGA TCAGCTTGCC GACACGGCCG TGCGTGCGCG TTCGGAAGTG CGCGAATCGT ACGTGCGCTA CCAGACCGCA TATGACCTCA CGCGCCACTA CCGCGACGAG GTCGTGCCCG TGCGCAAGCG CATCTCCGAC GAGATGCTGC TGCGCTACAA CGGCATGCTC GTGAGCGTGT TCGAACTGCT GGCCGATGCG CGCGAGCAGG TGAATGCCGT GAACGGCTAC ATCGACGCGC TGCGCGGTTA CTGGATTGCA CAGACCGACT TGCAGATGGC GCTGGGCGGC AGGCTGCCGC CCGCTGAAGC GAATGCGGCC ACCACAGCGC CGAACCCTCC TCAAGGACAT TGA
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Protein sequence | MLKPSTRRLA LCALAGTLLL LGGCATITQD SGFKTVADVA RDRLGKDATW HRSPEARDSA AQRTRELLAQ PLTMDSAVQI ALLNNRGLQA SYAELGLSEA ALVQASRLPN PGFSFKRTRS GDDLSIERTF SLSFLNLLTL PMATRIEGRY FEQTKLLVAN QMLQVATDTR RAYINAVAAE QSARYAEQVQ QAAEAGAEFA KRLASAGNFS KLDRAREHAF YAEATATLAR TRQQAQAERE ALIRLLGVWG TDTGFKLPER LPDLPKDRPE LQQIEAYALR NRLDIQAGRL QVDGLASSLG LTQATRFINV LDLGYVRNSK SNEPRETGYE IGIEIPLFDW GGARVARAQS IYMQAADQLA DTAVRARSEV RESYVRYQTA YDLTRHYRDE VVPVRKRISD EMLLRYNGML VSVFELLADA REQVNAVNGY IDALRGYWIA QTDLQMALGG RLPPAEANAA TTAPNPPQGH
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