| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3881 |
|---|
| Symbol | |
|---|
| ID | 6285005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 133388 |
|---|
| End bp | 133783 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642618377 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001892418 |
|---|
| Protein GI | 187926073 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3636] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02684] probable addiction module antidote protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.26577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAT TTCTGTCAGC GGCGCTCGAG ACGGGGGATG CCGCTTTTAT TGCGGAGTCG
ATCGGCGTGA TCGCTCGAGC GAAGGGTATC GCTCAAATTG CAGAAGAAAC GGGCCTTGGA
CGTACAAGCC TATACAAGGC ACTGCGCGCA GAGGGGAACC CGGCGTTCTC GACGGTACTG
CAGGTCATGA AGGCACTTGG GTTGCACTTG CAGGCCAAGC CCGCCGTATC CAAAGAGAAT
GTGGAGTCCG GCAAGCGTGG GGCCAACGCC AAAGCGAAAG GTGCAAAGGT GAGCGCGTCC
CGAAATGGCG GTGCAAACAA GCCTACAAGC AAGAAGCCCG CGACTCGTAC CAAGCGGGGC
TCTGCAACGG GACACGGAAA GGTCATCCCA ACTTAA
|
|---|
| Protein sequence | MAEFLSAALE TGDAAFIAES IGVIARAKGI AQIAEETGLG RTSLYKALRA EGNPAFSTVL
QVMKALGLHL QAKPAVSKEN VESGKRGANA KAKGAKVSAS RNGGANKPTS KKPATRTKRG
SATGHGKVIP T
|
|---|
| |