Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3859 |
Symbol | |
ID | 6284962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 108908 |
End bp | 111505 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618359 |
Product | aconitate hydratase |
Protein accession | YP_001892400 |
Protein GI | 187926055 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 [TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.30249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA CCCACAGAAA GCCCCTCCCC GGCACAAAGC TCGACTACTT CGACGCTCGC GAAGCTGTAG AAGCCATCAA ACAAGGCGCC TACGACAAGC TGCCCTACAC GTCACGCGTG CTGGCCGAAA ACCTGGTCCG CCGCTGCGAC CCCGCCACCC TCACCGACTC GCTCAAGCAA CTCATCGAGC GCAAGCGCGA TCTGGATTTC CCGTGGTTTC CGGCGCGCGT GGTCTGCCAC GACATCCTGG GCCAGACCGC GCTGGTGGAT CTGGCCGGCC TGCGCGACGC CATTGCCGAC CAGGGCGGCG ACCCCGCCAA GGTCAACCCG GTGGTGCCGG TGCAGTTGAT CGTCGACCAC TCGCTGGCCG TGGAGTGCGG CGGCTTCGAC CCCGATGCCT TCGCCAAGAA CCGCGCCATT GAGGACCGCC GTAACGAAGA CCGCTTCCAC TTCATCGACT GGACCAAGCT CGCGTTCAAG AACGTCGATG TGATCCCGGC GGGCAACGGC ATCATGCACC AGATCAATCT GGAGAAGATG TCGCCCGTCA TCCAGGCGCA TGACGGCGTG GCTTACCCCG ACACCTGCGT CGGCACCGAC AGCCACACGC CGCACGTGGA TGCGCTCGGC GTGATCGCCA TCGGCGTGGG CGGCCTGGAA GCCGAAAACG TGATGCTCGG CCGTGCATCA TGGATGCGCC TGCCGGACAT CGTTGGCGTG GAACTGACCG GCCAGCGCCA ACCCGGCATC ACCGCCACCG ATATCGTGCT GGCGCTGACC GAATTCCTGC GCAAGCAGAA GGTGGTGGGC GCCTACCTCG AGTTCTACGG CGAAGGTGCA TCCAAGCTGA CGCTGGGCGA CCGCGCCACC ATCTCCAACA TGGCCCCCGA GTACGGCGCC ACCGCGGCGA TGTTCTCGAT TGACGACAAC ACGCTCGACT ACCTGCGCCT GACCGGCCGC ACCGACGAGC AGGTCAAGCT GGTCGAGACG TATGCCAAGA CCGCGGGCCT GTGGTCCGAC ACGCTCAAGC ACGCTGAATA CGAACGCGTG CTGCGCTTCG ATCTGTCGAG CGTGGTGCGC AACATGGCCG GCCCATCCAA CCCGCACGCG CGTGTGGCAA CGACCGACCT GGCCGCCAAG GGCATCGCCG GCAAGTGGGA AGAAACGCCG GGCCAGATGC CGGACGGCGC GGTCATCATC GCGGCCATCA CGAGCTGCAC GAACACCAGC AACCCGCGCA ACGTGATTGC CGCCGCGCTG CTGGCCCGCA ACGCCAACCG CCTGGGGCTG ACGCGCAAGC CGTGGGTGAA AAGCTCGCTG GCGCCGGGCT CCAAGGCCGT TGAGCTGTAT CTGGAAGAAG CCGGCCTCAA GCACGAACTC GAAAAGCTCG GCTTCGGCAT CGTCGCGTTT GCCTGCACCA CCTGCAACGG CATGAGCGGC GCGCTGGACC CGAAGATCCA GCAAGAGATC ATCGACCGCG ACCTGTATGC CACAGCCGTG CTGTCGGGCA ACCGCAACTT CGACGGCCGC ATCCACCCGT ATGCCAAGCA AGCGTTCCTC GCATCCCCGC CGCTGGTGGT GGCCTATGCG ATTGCGGGCA CGGTACGTTT CGACATCGAG CGTGACAGCT TCGGCACCGA TGCCAACGGC AAGCCGATTC TGCTGAAGGA CCTGTGGCCG ACCGACGAAG AGATCGACGC CATCGTGCGT GCGTCGGTCA AGCCGGAGCA GTTCCGCACG GTGTACATCC CGATGTTCGA GCAGCGCAGC GAAAGCACCG CCAAGGTGAG CCCGCTGTAC AACTGGCGCC CGCAGAGCAC CTACATCCGC CGCCCGCCAT ATTGGGAAGG TGCGCTGGCT GGTGAACGCA CGCTCAAGGG CCTGCGCCCG CTGGCCGTGC TGGGCGACAA CATCACGACC GACCACCTCT CGCCGTCCAA CGCCATCCTG GCCAGCAGCG CCGCCGGTGA ATACCTCGCC AAGATGGGCC TGCCGGAAGA GGACTTCAAC TCGTACGCCA CGCACCGCGG CGATCACCTG ACCGCCCAGC GCGCGACGTT TGCCAACCCG ACCCTCATCA ACGAGATGGC CGTGGTGGAT GGCGCGGTGA AGAAGGGTTC GCTGGCGCGC ATCGAGCCCG AAGGCAAGGT CACGCGCATG TGGGAAGCCA TCGAGACCTA CATGGACCGC AAGCAACCGC TGATCGTGAT TGCCGGTGCC GACTACGGCC AGGGCAGCTC GCGTGACTGG GCCGCCAAGG GCGTGCGCCT GGCTGGCGTG GAAGCCATCG TGGCCGAAGG CTTCGAGCGC ATCCACCGCA CCAACCTGAT CGGCATGGGC GTGCTGCCGC TGGAGTTCAA GCCGGGCACC ACGCGCCTGA CGCTGAGCAT TGACGGCACC GAAACGTATG ACGTTATCGG CGAGCGCAAG CCGCGTGCAG ACCTCACGCT CGTCATCCAC CGCAAGAACG GCGAACGCGT GGAAGTGCCC GTCACGTGCC GTCTGGACAG CGACGAGGAA GTCTCGATCT ACGAAGCCGG CGGTGTGCTG CAGCGCTTTG CGCAGGACTT CCTTGAGTCT TCGAAGGAGG CAGCATGA
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Protein sequence | MNTTHRKPLP GTKLDYFDAR EAVEAIKQGA YDKLPYTSRV LAENLVRRCD PATLTDSLKQ LIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAD QGGDPAKVNP VVPVQLIVDH SLAVECGGFD PDAFAKNRAI EDRRNEDRFH FIDWTKLAFK NVDVIPAGNG IMHQINLEKM SPVIQAHDGV AYPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDIVGV ELTGQRQPGI TATDIVLALT EFLRKQKVVG AYLEFYGEGA SKLTLGDRAT ISNMAPEYGA TAAMFSIDDN TLDYLRLTGR TDEQVKLVET YAKTAGLWSD TLKHAEYERV LRFDLSSVVR NMAGPSNPHA RVATTDLAAK GIAGKWEETP GQMPDGAVII AAITSCTNTS NPRNVIAAAL LARNANRLGL TRKPWVKSSL APGSKAVELY LEEAGLKHEL EKLGFGIVAF ACTTCNGMSG ALDPKIQQEI IDRDLYATAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTVRFDIE RDSFGTDANG KPILLKDLWP TDEEIDAIVR ASVKPEQFRT VYIPMFEQRS ESTAKVSPLY NWRPQSTYIR RPPYWEGALA GERTLKGLRP LAVLGDNITT DHLSPSNAIL ASSAAGEYLA KMGLPEEDFN SYATHRGDHL TAQRATFANP TLINEMAVVD GAVKKGSLAR IEPEGKVTRM WEAIETYMDR KQPLIVIAGA DYGQGSSRDW AAKGVRLAGV EAIVAEGFER IHRTNLIGMG VLPLEFKPGT TRLTLSIDGT ETYDVIGERK PRADLTLVIH RKNGERVEVP VTCRLDSDEE VSIYEAGGVL QRFAQDFLES SKEAA
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