Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3767 |
Symbol | |
ID | 6285794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 4367 |
End bp | 5773 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618268 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_001892310 |
Protein GI | 187925965 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.114638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0523944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACATA TCCTGATTGT CGAAGATGAT GCCAACGCGC GCGCCGCGCT AGGTGAGCTG GTCGGTGCAG AAGGCTTTAC CACCGCGCTG GCCGGGTCGT TGCGCGATGC GCGCATTCAG ATGTCGCGTC ACAGCCCCGA CGCGGTGCTG ATCGACCTGA TCCTGCCCGA TGGCAACGGC ATGGATCTGA TGGAAGACAT CGCGCCCCAC TCCGGCACGG AGATCATCGT CATGACCGGC CACGCCAGCG TCGAGACAGC GGTCGAGGCG CTGCGCATGG GCGCGGCCGA TTACCTCGTC AAGCCGGTCA ATTTCCAGCG GCTCAAATCG GTGCTCGCGC GCATTCCTCG CCCGGGCGAT CTCAAGGCCG AGATCGGCAA CCTGCGGGGT GAGTTGCGCC GCCTGGGCCT CTTCGGCCAG ATGCTGGGCA ACTCGACGGT GATGCAGACC CTGTATGACC AGGTCAGCCG CGTGGCGCCC ACCGAGGCGA CCGTCCTGCT CATTGGCGAA TCGGGCACCG GCAAGGAACT GGCCGCGCAG ACCATCCACG ACCTGAGCCT GCGCCGCAAG CAGCCTTTCC TGCCGGTCAA CTGCGGCGCC ATCTCGCCCA ACCTGATCGA ATCGGAGATG TTTGGCCACG AGCGCGGCAG CTTTACCGGC GCGGATCGCC AGCACAAGGG CTACTTCGAG CGCGCCAACG GGGGCACGCT GTTCCTGGAT GAGATCACCG AGATGCCGAT CGAGCTGCAG GTCAAGCTGC TGCGCGTGCT GGAGACCGGC GTGTTCATGC GCGTGGGTAC CAACCGCGAG ATCGACTCCG ACGTGCGCGT GATTGCCGCC ACCAACCGCG ACCCCGAAGA AGCGGTTGCC GACGGCAAGC TGCGCGCCGA CCTGTACCAC CGTTTGAACG TGTTCCCGCT GCAACTGCCC CCACTGCGCG AACGCGGCAA GGATGTCGAG CTGCTCGCGC AGCATTTCCT GGATCAGCTC AATGCACAGA GCAACACCAA GAAGGCGTTC CTGCCGCCGG CCATGGAGAC GCTGCGCGCG TACAACTGGC CGGGCAATGT GCGTGAGCTG CGTAACTACG TGCAACGCGC CTACATCCTG TCGGACGACG CCGGGATCGA CACGGCCAAC GTGCCGCTGC AAGTGTCGAG CACGCAAACC GGCTCCGGCG GCTCGACGCT GACGATTCCG GTGGGCACGT CGCTGGCCAG CGCCGACAAG AAGATCATCC TGGCCACCCT CGAGCAGTGC GGTGGCGTCA AGAAGCGCGC GGCGGAGCTG CTCGGCATCA GCCTGAAAAC GCTGTACAAC CGGCTCGAGG AATACAACAG CAACAGCGAC GCCGATGACG GTGGCGATGA CACCGGCCCG GGCCGCGCGC ATATCACGGA AGCCTAG
|
Protein sequence | MPHILIVEDD ANARAALGEL VGAEGFTTAL AGSLRDARIQ MSRHSPDAVL IDLILPDGNG MDLMEDIAPH SGTEIIVMTG HASVETAVEA LRMGAADYLV KPVNFQRLKS VLARIPRPGD LKAEIGNLRG ELRRLGLFGQ MLGNSTVMQT LYDQVSRVAP TEATVLLIGE SGTGKELAAQ TIHDLSLRRK QPFLPVNCGA ISPNLIESEM FGHERGSFTG ADRQHKGYFE RANGGTLFLD EITEMPIELQ VKLLRVLETG VFMRVGTNRE IDSDVRVIAA TNRDPEEAVA DGKLRADLYH RLNVFPLQLP PLRERGKDVE LLAQHFLDQL NAQSNTKKAF LPPAMETLRA YNWPGNVREL RNYVQRAYIL SDDAGIDTAN VPLQVSSTQT GSGGSTLTIP VGTSLASADK KIILATLEQC GGVKKRAAEL LGISLKTLYN RLEEYNSNSD ADDGGDDTGP GRAHITEA
|
| |