Gene Rpic_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3701 
Symbol 
ID6286872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3881028 
End bp3882266 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content66% 
IMG OID642627285 
Product6-phosphogluconolactonase 
Protein accessionYP_001901251 
Protein GI187930764 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC GTCTTCGTCG AACTTTCATG CAGTGGACTG GTAGCTTGCC TTTGCTGGGC 
GCTCTTCCCA AAACCGTCAT GGCCCAGGCG GGCGAGCAAC CCGCTGCGTC GGGTGTGCAG
CCTGCGGGCA ATGCTCGCCC TTCCCGCTTT GCCTATGTCG GCACGTACAC GTTCAACGCA
CCGGGCGGCA CCGCCGGCGG CCCGGCCGCA CGTGGCATCT ACGTGCTCGC GCCGCGCGGC
GAAGCGTGGA CCCAGGTGCA GGTGGTCGAA AGTGCCAATC CGTCATTCCT GGCCGTGCAC
CCAAACCAGC GGTTCCTGTA CGCCATCAAT GAATTGGAGG TCTACGAGGG TCGCCCAAGC
GGCAGCGCCG AGTCCTATGC GATCGACCCG CACGACGGCA AGCTGACGCT GCTCAACCGC
CAGCCGCTCT CTTTGTCGGG TACGAACCCT GCGCACGTGG TGGTGTCGCC GGACGGCAAA
CACCTGTGCG TGTCGATCTA CAGCGGCGGT GCGTACAACC TCCTGCCGAT CGGCGAGGAC
GGTAAGCTCG GCGCCGTGTC CGGCATCTTC AAGGACACCG GCTCCGGCCC CCGCCCCGAA
CAGGAAGCGC CGCACGCGCA CATGATGCTG TTCGACACCA CCGGCCAGCA CGTGATCGGT
ACCGATCTGG GCACCGACCG CATCAACGTG TTCGCCATCG AAGGCGGCAA GCTCGCCCCG
CGGGATCGCG CGCAGCTCAA GCCCGGCAGC GGCCCGCGCC ACCTGGCGCT GCATCCGCAG
GGCAAGCTGC TCTACGTCAT CAACGAACTC GAGGGATCGG TCGCCTGCCA CGGTTACGAC
TCCGCTACCG GCCATGTGTC GGAGGAGCGC CAGCGCATCT CCACAACGCC CGCCGACTAC
ACCGGCCATA AGAGCGGCGC CGAGATTCTT GTGCACCCGT CGGGGCGCTT CCTCTACGCC
AGCAACCGGA AGCTGAAGTC CGATCATCCG CTGGCCGACA GCGTGGCCGC GTTCAGCATC
GATGCCTCGG GCAAGCTCGC GCCGCTTCAG TACTGGAACG AGGGAGTGCG CTTTCCGCGG
GCGATGGCGA TGGCGCCCGA CGGCAGCCAC CTCTACGTGC TGAACCAGAA GGGCGACACG
ATCCTGCGGC TGCGCATCGA CGGGCAGACC GGCAAGCTGG ACCAGCCCGC GGTGGTGGCG
AAGGTGCCGA CGCCGGTGTG TCTGGTGTTT ACGGCATAA
 
Protein sequence
MTNRLRRTFM QWTGSLPLLG ALPKTVMAQA GEQPAASGVQ PAGNARPSRF AYVGTYTFNA 
PGGTAGGPAA RGIYVLAPRG EAWTQVQVVE SANPSFLAVH PNQRFLYAIN ELEVYEGRPS
GSAESYAIDP HDGKLTLLNR QPLSLSGTNP AHVVVSPDGK HLCVSIYSGG AYNLLPIGED
GKLGAVSGIF KDTGSGPRPE QEAPHAHMML FDTTGQHVIG TDLGTDRINV FAIEGGKLAP
RDRAQLKPGS GPRHLALHPQ GKLLYVINEL EGSVACHGYD SATGHVSEER QRISTTPADY
TGHKSGAEIL VHPSGRFLYA SNRKLKSDHP LADSVAAFSI DASGKLAPLQ YWNEGVRFPR
AMAMAPDGSH LYVLNQKGDT ILRLRIDGQT GKLDQPAVVA KVPTPVCLVF TA